Eutrema salsugineum (saltwater cress): EUTSA_v10008012mg
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Entry
EUTSA_v10008012mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10008012mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10008012mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EUTSA_v10008012mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
18992801
NCBI-ProteinID:
XP_006416304
UniProt:
V4KX76
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MVMVGGASMELDQCFQKMKMEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCSGWRD
AISLGLTRLRLSWCKNNMNSLVLSLAPKFVKLQALILRQDKPQLEDNAVEAIANHCHELQ
ELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDTAIAYLIRFCRKLKVLNLCGCV
QAVSDHALEAIGNNCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESV
VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGQWKSVKKEKYDEEGLRSLNIS
QCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAHSVFPHPAH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtaggaggagcatccatggaactggaccagtgctttcagaagatgaagatg
gaaggaatctcgatcaaagagtggaaagacatccctgtggagcttctgatgaggatcctt
tcccttgtcgatgatcggaatgtcattgttgcttctggtgtttgcagtggttggagagat
gccatatctcttggcctcactcgtctacgtctctcttggtgcaaaaacaacatgaacagt
ttggttctttctcttgctccgaagtttgtaaagctgcaggctttaatactacggcaggac
aaaccgcaactagaggacaatgcagtggaggcaatagcaaatcactgccatgagctacaa
gagcttgatctcagcaaaagcttgaaacttactgatcgttccctttacgcacttgctcat
ggctgccctaacctcactaaactcaaccttagcggatgcacttcattcagcgacactgct
attgcttatttgatcagattctgtagaaagctcaaagttctgaatctttgtggatgtgtc
caagctgtatctgaccatgccttggaggctattgggaataactgtaaccagttgcagtca
cttaacttgggatggtgtgagaatatcagtgatgatggggttatgagtttagcttatggc
tgcccagatctcaggaccctggacttgtgtggatgtgttctcatcacagatgagagcgta
gtggctttagcagattggtgtgtgcacttgagatcactggggctatattactgcagaaac
ataacagacagagcgatgtactcactagcacaaagcggagtaaagaacaaaccgggacaa
tggaaatcggttaagaaggagaaatacgacgaagaagggcttagaagtctcaacatcagc
caatgcactgcccttacaccttcagcggttcaagcggtttgcgacacctttcccgctctt
cacacatgttcgggaaggcattcgcttgtcatgagcggttgtcttaacttgacatctgtg
cactgtgcttgtattcttcaggctcatcgcgcacacagtgtgtttcctcatccggctcat
tga
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