Eutrema salsugineum (saltwater cress): EUTSA_v10008017mg
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Entry
EUTSA_v10008017mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10008017mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10008017mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EUTSA_v10008017mg
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EUTSA_v10008017mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Cas9_RuvC
PspC
Motif
Other DBs
NCBI-GeneID:
18994226
NCBI-ProteinID:
XP_006417918
UniProt:
V4MVN9
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MNENQQLRSEPRTTKVWGRNIDEEMARLKECLKRYPLIAFDTEYPGIIHRTYIDSSSDEW
YIAMKANVESTKLIQCGFTLFNAKGEIGGTWEINFSNFGDPSDTRNEISIEFLRRHGLDL
DKIRNEGVDMFGYGFFPKLLSAFRSQKNVEFVTFQGAYDFAYFLCILNNGKLPETRGEFA
SEVVKVFGDVYDLKVMAGFCEGLGEHLGLSKLAQLLKIARVGRAHHAGSDSLMTALVFSK
LKQVYEDSNFAKGMLYGIGKRMVVTSTTPELASSPVMCQQSLVSYPSSDLIYHNGYVPNY
DQSQLVGPLVYWNPSGIQWMNYNGVYVNQLNQLPSTTFPYPSQTPYAADYLGPLPNYLMQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaatcagcaattaagatcagagccgaggacgacgaaagtatgggggaggaac
atcgatgaagagatggctcgattgaaagaatgtcttaagcgatacccactcatcgctttc
gatacagagtaccctgggattattcaccggacttacattgactcctcctccgacgaatgg
tacatcgccatgaaagccaacgtcgaatcgacgaagctgatccagtgtggcttcactctc
ttcaacgccaagggagagatcggtggcacttgggagattaacttctccaatttcggcgac
ccatcagacactcgcaacgagatttcgatcgagtttctgaggagacacggtttggatttg
gacaagattagaaacgaaggagttgacatgttcgggtatgggtttttccccaagctcctc
tctgcgtttcgctctcagaaaaacgtcgagttcgttactttccagggagcttacgatttc
gcctacttcttgtgtatcctcaacaatgggaaactccccgagactcgcggagagtttgca
tcagaggttgtgaaagtctttggcgatgtttacgacttgaaggtcatggctggattctgc
gaagggctcggtgaacacctcgggttaagcaaactagctcagctactgaagatcgcacgt
gtgggaagagcacatcacgctggttcagacagcttaatgactgcgcttgtctttagcaag
cttaagcaagtctatgaagactctaactttgctaaaggaatgctctatggaattgggaaa
agaatggtggttacatccaccacgcctgagctagcttcctcgcctgtgatgtgccagcag
agtctagtctcgtatccttcttctgatctgatttaccataatggttatgtcccaaactat
gaccagtctcagcttgtgggccctcttgtctactggaatccttcaggtattcaatggatg
aactataatggtgtgtatgtgaatcagcttaatcagctaccttcgaccactttcccttac
ccgtctcagacaccatatgctgctgattaccttggaccgcttcccaattacttaatgcaa
taa
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