KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10008091mg
Entry
EUTSA_v10008091mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    EUTSA_v10008091mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10008091mg
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10008091mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EUTSA_v10008091mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     EUTSA_v10008091mg
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EIPR1 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st MIOS_WD40
Other DBs
NCBI-GeneID: 18993578
NCBI-ProteinID: XP_006417175
UniProt: V4L714
LinkDB
Position
Unknown
AA seq 346 aa
MGTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEI
VQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDQSRV
ELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKE
VFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSM
GQQIEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggcacgagcagcgatccgatccaagatggttccgatgagcagcagaaacgatcagag
atctacacatacgaagcgccatggcacatctacgcaatgaattggagcgttcgtcgcgat
aagaagtaccgtctcgccatcacaagcctgctcgagcagtacccgaaccgagtcgagatt
gtgcagctcgatgaatccaatggcgagatccgttcagaccctaatctctccttcgagcat
ccttacccacccaccaagaccattttcatccctgacaaggaatgccagcgacccgatctt
ctcgctacctcaagcgatttccttcgtctatggcgtatcgccgacgatcaatcccgcgtg
gagctcaaatcttgtctcaatagcaacaagaacagcgagttctgtggtcctttgacttcc
ttcgattggaacgaagctgagccacgccgaatcggaacatcgagcaccgatacgacttgt
acaatctgggacatcgagcgtgaagctgttgatactcagcttatagcacatgacaaggaa
gtcttcgacattgcttggggtggagttggcgtcttcgcctccgtctcagctgatggctcc
gtgagggtatttgatcttcgtgataaggaacattcgacgattatctacgagagctctgag
ccagacactcctttggtgcgtcttggttggaacaagcaggatccaaggtatatggctacc
attatcatggacagtgctaaagtcgtggtgctcgacattcgttttccagctcttccggtg
gttgagcttcagcgacatcaagctagtgtcaatgccatagcttgggctcctcatagctct
tgccacatctgtactgcaggagacgattcacaagctttgatttgggatatttcttccatg
ggacagcaaattgaaggtggtcttgaccctattcttgcttacacagctggtgctgagatt
gagcagctgcaatggtcttcttctcagcctgattgggtcgctattgctttctcaacgaag
ctgcaaattctcagggtttga

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