KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10008183mg
Entry
EUTSA_v10008183mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10008183mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eus04147]
    EUTSA_v10008183mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     EUTSA_v10008183mg
Exosome [BR:eus04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   EUTSA_v10008183mg
  Exosomal proteins of colorectal cancer cells
   EUTSA_v10008183mg
  Exosomal proteins of bladder cancer cells
   EUTSA_v10008183mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF4 PROPPIN Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd WD40_like
Other DBs
NCBI-GeneID: 18993099
NCBI-ProteinID: XP_006416642
UniProt: V4KBD8
LinkDB
Position
Unknown
AA seq 328 aa
MAEGLILKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGISTRRFVGHNKDVLSVAFSLDNRQI
VSASRDRTIKLWNTLGECKYTISEGGSEGHNDWVSCVRFSPNTLQPTIVSASWDKTVKVW
NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIH
ALCFSPNRYWLCAATEQGIKIWDLESKSIVEDLKVDLKAEAEKSDGSGTAATKKKVIYCT
SLNWSADGSTLFSGYTDGVIRVWGIGRY
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggaaggactcattttgaagggtaccatgcgtgcacacactgacatggtgacggca
atcgccacgcctattgataacgcagacatcatcgtctcagcatcacgcgacaaatcgatc
atcctatggaaactcaccaaggacgataaggcctacggtgttgctcagaggcgtctcact
ggccactcccacttcgtcgaggatgtcgttctatcctcagatggacaattcgcgctttcc
ggaagctgggacggcgagctccgcctttgggatctcgccgccggtatctccactcgcaga
ttcgtcggacacaacaaggacgtgctctccgtcgcattctcccttgacaatcgtcagatc
gtctcggcgtcgcgtgaccgtacgatcaagctgtggaacactctaggtgagtgcaagtac
acgatctccgaaggaggcagtgagggacacaatgattgggttagctgcgtcagattcagc
ccaaacacgctccagccgacaattgtgtcagcctcgtgggacaaaactgtgaaagtgtgg
aacctctcgaactgtaagctgaggtcgactcttgctggtcacaccggatacgtgagcacg
gtggctgtatcacccgatggttctctctgtgcgagcggaggcaaagacggtgtggttttg
ctgtgggatttggccgaggggaagaagctttactctctcgaagctaactctgtgatccat
gctctctgcttcagccccaataggtactggctatgtgctgcaaccgagcagggtattaag
atttgggatctagagagcaagagcattgttgaggacttgaaggttgatctcaaagccgag
gccgagaagtcagacggaagtggtactgcagccaccaaaaagaaggttatttactgcact
agcctgaactggagtgcggatggaagcaccttgttcagtggttataccgatggagttatt
agagtttggggcattggccgttactag

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