Eutrema salsugineum (saltwater cress): EUTSA_v10008316mg
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Entry
EUTSA_v10008316mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
eus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10008316mg
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10008316mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10008316mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10008316mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EUTSA_v10008316mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EUTSA_v10008316mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
X-Tfes_XVIPCD
Peptidase_C6
Motif
Other DBs
NCBI-GeneID:
18993075
NCBI-ProteinID:
XP_006416613
UniProt:
V4MT40
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MASVASKLYSDDVSLLVLLLDTNPFFWSTTSIKFSQFLSHVLAFLNAVLGLNQLNQVVVI
ATGYSSCDYIYDSSLTPNGNFESSGSGMPALFGSLLEKLEDFAAKDEELSKEEEHEDRIA
SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI
DSCYIGTQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPVGVD
FRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDVSSVSNKKRKAPDT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgttgcttcgaagctgtattcagacgatgttagtcttctagttttgttgctt
gacacgaatccttttttctggagcactacgtcgattaagttctctcagttcctctctcat
gtgcttgcttttctgaacgcagttttgggattaaaccaattgaaccaagttgtagttata
gctactggatacagttcctgtgattacatttatgattcgtctttgacacctaatgggaat
ttcgagagcagtggaagtggaatgcctgctctttttggttctttgctggagaaattggaa
gattttgctgccaaagacgaggagctcagcaaggaggaggagcatgaggatagaatagct
tcctctctcttgtcaggatcactctccatggctctttgctatatacagagggttttccgt
tctggacatcttcatcctcagcctcggattttatgcttgcaaggttccccagatggcccg
gaacaatatgtagctgtaatgaactctatcttctctgcccaacgcttgatggttcccatt
gattcatgttacataggtacacagaactcagcatttttacagcaggcatcttatataact
ggcggggtgcatcatacacctaaacagttggatgggctgtttcagtatctaacgacgatc
tttgcaactgatttgcactcccgcggctttgtacaacttcctaaacccgtaggcgttgat
tttcgcgcatcgtgtttttgccacaaaaagactatcgatatgggctacatctgttcagtg
tgtctgtccattttctgtgagcatcacaagaaatgttcaacgtgcgggtctgtttttggc
cagtctaaacttgatgatgtttcatctgtctctaacaagaagagaaaagctcctgatacc
taa
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integrated database retrieval system
