Eutrema salsugineum (saltwater cress): EUTSA_v10009105mg
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Entry
EUTSA_v10009105mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10009105mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10009105mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EUTSA_v10009105mg
mRNA degradation factors
5'-3' decay
Lsm complex
EUTSA_v10009105mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18993009
NCBI-ProteinID:
XP_006416534
UniProt:
V4KXW9
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDL
YCDIPLGLYIIRGENVVLIGELDVEKEELPAQMVQVSEAEIKRAQKAEKEEMLLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcctgatgatatcttcttctccacttctcttgccgcatacttagac
aagaaacttcttgtcttgcttcgtgatggtcggaagctgatgggtctacttcgttccttt
gatcaattcgctaatgctgtcttagaagaagcttatgaaagagtcatcgtgggtgatctc
tactgtgatattcccttgggtctatacataatccgtggagagaatgttgtcttgattggt
gaacttgacgttgaaaaggaagagcttcctgcccaaatggttcaagtttcagaggcagag
atcaaaagggctcagaaagcagagaaggaagaaatgcttttaaagggtacgatgcggaaa
agaatggagttccttgatctcgattag
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integrated database retrieval system