Eutrema salsugineum (saltwater cress): EUTSA_v10009477mg
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Entry
EUTSA_v10009477mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03410
Base excision repair
eus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUTSA_v10009477mg
03450 Non-homologous end-joining
EUTSA_v10009477mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10009477mg
Enzymes [BR:
eus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUTSA_v10009477mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
EUTSA_v10009477mg
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
EUTSA_v10009477mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
Cdd1
HHH
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
18993827
NCBI-ProteinID:
XP_006417457
UniProt:
V4KDK3
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MAPKRGRNRSPSPDPAGMFAGMVVFMVQTGVQRRRLEIWKQKLVQMGAVIEENRLTKKVT
HVLALNLEALLEKFGKESLSEFRGHFLLYQWLEDSLTAGEKANEDLYVLKIDSEETEEPN
KSLPEDSVSEDQPSTQKRTRYSPDAGDIVGVENQTNTQGSPNSPTSCSVPSTSANPGEGT
AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKLPTK
IESVDQLQHLPGIGKAMKDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATAL
KLYDKGHRTLEDLKNEDSLTHAQRLGLKYFDDIRTRIPRQEVQEMEQLLQRVGEEILPGV
NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKDINFLREDLIFSTHSEEG
TDAGVDTYFGLCTYPGQELRRRIDFKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYR
LDDTGLFPATHSSSGNRGARASASLKLSTEKQVFDFLGFPWLEPHERNL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagcgagggagaaaccggtcgccgtctccggacccggcggggatgttcgcc
ggaatggtagtttttatggtgcaaactggagtccagcgtcgtcgattagagatctggaag
cagaagctggttcaaatgggagcagtgatcgaggaaaatcggttaacgaagaaagtcact
catgttctcgccttgaatctcgaagcccttcttgaaaaatttgggaaagaatctctgtcg
gaatttagaggacactttctgctttaccaatggttagaagatagcttaactgcaggagag
aaggctaatgaagacttgtatgttctcaaaattgactcagaagaaactgaagagccgaac
aagtctttgcctgaagatagtgttagtgaggatcaaccatcaacacaaaaacgaactaga
tactcccctgatgctggtgatattgtaggcgtcgaaaaccaaaccaatacacaaggatca
ccgaattcacctacaagttgcagtgttccatcgactagtgctaatcctggagaaggcact
gcagagactcccactagtccacaatcagagtccacatcagtgtacaaaccacccgatttg
aacagaaacattaccgagatatttggaaagctaataaacatatatagagctttgggtgat
gataggcggtcctttagctattacaaagctatcccggtcattgaaaagctccccactaag
attgaaagcgttgatcagctccaacacctccctggaattggaaaggcaatgaaagatcat
attcaagagatcgtgacaacagggaagttgtccaagttggaacactttgaaacagatgag
aaggtacgtacaatcagtttgtttggggaggtttggggtattggtcctgcaactgcactc
aagctatatgacaaaggacatcgcacactagaagacttgaagaacgaggattcactaacg
catgcgcagaggttgggattgaaatattttgatgatattagaacaaggatcccacgacag
gaggtgcaagagatggaacaacttctacagagagttggcgaggaaattttgcctggtgtg
aatattgtatgtggaggatcatatagacgtgggaaggctacttgtggagatctagatatc
gttgtcacacatcctgatggacaaagtcacaaaggtttcttgacaaagttcgtaaagcgt
ttgaaggatatcaattttctgagagaagatctcattttcagcacccacagtgaagagggt
actgatgcaggggttgatacgtattttggtctctgcacttatcctgggcaagagctccgg
cgccgtatcgatttcaaagtttatccaagggatatctatgcattcggcctcatagcatgg
acagggaacgacgtcctgaacagaaggctgagattgctagcagaatccaaaggatatcga
ctcgatgacactggactattccctgctactcacagctcaagtggtaaccggggtgctaga
gcaagtgcaagcctgaaactctccacggagaaacaagttttcgacttcctggggtttcct
tggctcgagccacacgagaggaatctctag
DBGET
integrated database retrieval system