KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10009477mg
Entry
EUTSA_v10009477mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03410  Base excision repair
eus03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EUTSA_v10009477mg
   03450 Non-homologous end-joining
    EUTSA_v10009477mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10009477mg
Enzymes [BR:eus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EUTSA_v10009477mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     EUTSA_v10009477mg
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     EUTSA_v10009477mg
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 HHH_5 NTP_transf_2 Cdd1 HHH BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 18993827
NCBI-ProteinID: XP_006417457
UniProt: V4KDK3
LinkDB
Position
Unknown
AA seq 529 aa
MAPKRGRNRSPSPDPAGMFAGMVVFMVQTGVQRRRLEIWKQKLVQMGAVIEENRLTKKVT
HVLALNLEALLEKFGKESLSEFRGHFLLYQWLEDSLTAGEKANEDLYVLKIDSEETEEPN
KSLPEDSVSEDQPSTQKRTRYSPDAGDIVGVENQTNTQGSPNSPTSCSVPSTSANPGEGT
AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKLPTK
IESVDQLQHLPGIGKAMKDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATAL
KLYDKGHRTLEDLKNEDSLTHAQRLGLKYFDDIRTRIPRQEVQEMEQLLQRVGEEILPGV
NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKDINFLREDLIFSTHSEEG
TDAGVDTYFGLCTYPGQELRRRIDFKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYR
LDDTGLFPATHSSSGNRGARASASLKLSTEKQVFDFLGFPWLEPHERNL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggcgccaaagcgagggagaaaccggtcgccgtctccggacccggcggggatgttcgcc
ggaatggtagtttttatggtgcaaactggagtccagcgtcgtcgattagagatctggaag
cagaagctggttcaaatgggagcagtgatcgaggaaaatcggttaacgaagaaagtcact
catgttctcgccttgaatctcgaagcccttcttgaaaaatttgggaaagaatctctgtcg
gaatttagaggacactttctgctttaccaatggttagaagatagcttaactgcaggagag
aaggctaatgaagacttgtatgttctcaaaattgactcagaagaaactgaagagccgaac
aagtctttgcctgaagatagtgttagtgaggatcaaccatcaacacaaaaacgaactaga
tactcccctgatgctggtgatattgtaggcgtcgaaaaccaaaccaatacacaaggatca
ccgaattcacctacaagttgcagtgttccatcgactagtgctaatcctggagaaggcact
gcagagactcccactagtccacaatcagagtccacatcagtgtacaaaccacccgatttg
aacagaaacattaccgagatatttggaaagctaataaacatatatagagctttgggtgat
gataggcggtcctttagctattacaaagctatcccggtcattgaaaagctccccactaag
attgaaagcgttgatcagctccaacacctccctggaattggaaaggcaatgaaagatcat
attcaagagatcgtgacaacagggaagttgtccaagttggaacactttgaaacagatgag
aaggtacgtacaatcagtttgtttggggaggtttggggtattggtcctgcaactgcactc
aagctatatgacaaaggacatcgcacactagaagacttgaagaacgaggattcactaacg
catgcgcagaggttgggattgaaatattttgatgatattagaacaaggatcccacgacag
gaggtgcaagagatggaacaacttctacagagagttggcgaggaaattttgcctggtgtg
aatattgtatgtggaggatcatatagacgtgggaaggctacttgtggagatctagatatc
gttgtcacacatcctgatggacaaagtcacaaaggtttcttgacaaagttcgtaaagcgt
ttgaaggatatcaattttctgagagaagatctcattttcagcacccacagtgaagagggt
actgatgcaggggttgatacgtattttggtctctgcacttatcctgggcaagagctccgg
cgccgtatcgatttcaaagtttatccaagggatatctatgcattcggcctcatagcatgg
acagggaacgacgtcctgaacagaaggctgagattgctagcagaatccaaaggatatcga
ctcgatgacactggactattccctgctactcacagctcaagtggtaaccggggtgctaga
gcaagtgcaagcctgaaactctccacggagaaacaagttttcgacttcctggggtttcct
tggctcgagccacacgagaggaatctctag

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