Eutrema salsugineum (saltwater cress): EUTSA_v10009520mg
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Entry
EUTSA_v10009520mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10009520mg
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10009520mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10009520mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10009520mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EUTSA_v10009520mg
mRNA cycle factors
Stress granule specific factors
EUTSA_v10009520mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
Complex C specific factors
EUTSA_v10009520mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_5
RRM_RdRP1_2
C-JID
xRRM
ASD2
Motif
Other DBs
NCBI-GeneID:
18991649
NCBI-ProteinID:
XP_006415030
UniProt:
V4L0X4
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MTATNLRIRQRFWTPVGKESNDGDETAASKEKRFRVFGWFEFLTMGTSVEVRLSDMILKN
EFGKFSLYVGDLDSSVEESDLYNKFDAVGEVSSIRICRDRNTGSSLGYAYVNFNHHSHAE
KAMKELNFVEIKGKPMRIMISKRDPSMRKSGKGNVFVKNMDKSIDNKQLAHLFSSFGIIL
SCKVARDASGVSKGHGFVQFYSEAAHRRAINELHGTVTDADLKTIFGEFGEITSAVVMRD
GKGKSRRFGFVNFKKSEAAVTAIENLNGTTVHEKELYVGRAQKKKNRVEVLKASFKLEKI
KRDVRRPKGLNLYVKNLEDSVNDKKLQDLFSEFGTITSCKVMNHSNGMSKNVGFVEFSTG
EEASKAMLEMNGKMVGQKPIYVSLAQRKEERRLHPQTQFNNVVSLRPSPHQHPIFTQATA
PATMLPPQLPFRGYHFQPHVMFGSRLPNGFPAMHVPNVMVPQPLYPPPLPVTLHHCLQPM
MSMTLQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgaatcttcgaattcgtcagagattctggacgccggttggaaaagagtcc
aacgacggcgacgaaacggcggcgtcgaaggagaaacggtttcgtgttttcggatggttt
gagtttttaaccatgggaacttctgttgaagttaggcttagcgatatgatcttgaaaaac
gaatttgggaagttttcgttatacgttggagatcttgattcgagcgttgaagagagtgat
ctatacaacaaattcgatgcagtcggtgaggtttcttcaattagaatctgtcgtgaccga
aacaccggttcgtctcttggctatgcgtatgtcaatttcaaccatcattctcatgcggag
aaggcaatgaaggagcttaatttcgtggagattaaaggaaaaccgatgaggataatgatc
tcgaaacgtgatcctagcatgaggaagagcggcaagggtaacgtgttcgtcaagaatatg
gacaagtctatagacaacaagcaacttgcccacttgttctcttcatttggaataattctc
tcttgcaaagtcgctcgtgacgcttctggagtttccaagggacacggattcgtccaattc
tactcggaagctgcacatagacgtgccattaatgaactccatggcactgtgactgatgct
gatttgaagacgattttcggagaatttggggagattactagtgccgttgtgatgagagac
ggaaagggtaagtctagaagatttggctttgtgaatttcaaaaaatccgaggctgcggtt
actgctatagagaatctgaatgggacaaccgtccatgaaaaagagttgtacgttggaagg
gctcagaagaaaaagaatagagttgaagttttgaaagctagcttcaaattagagaagata
aaacgggatgtgagaaggcctaaaggtttgaatctctatgtaaagaatcttgaggattct
gttaacgacaaaaagcttcaagatttattctctgagtttggtaccatcacttcttgcaag
gtcatgaaccactcgaatggtatgagcaaaaatgttgggtttgttgagttctctacaggc
gaggaagcttctaaagctatgctggaaatgaatgggaagatggtaggacaaaaacctata
tatgtttctttggcccaacgtaaagaggaacgtcgacttcatccacaaactcagtttaat
aacgttgtttctctaagaccaagtcctcaccaacatcctatcttcactcaagcaaccgct
ccggcaacaatgttacctccacaacttccattccgaggataccatttccaaccgcacgtc
atgtttggatcaagattaccaaacggtttcccggcaatgcatgtcccaaacgtcatggtg
ccacaaccattgtatccacctcctcttccagtgaccttacaccactgtttgcagcctatg
atgtcgatgacactacagtaa
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integrated database retrieval system
