Eutrema salsugineum (saltwater cress): EUTSA_v10009915mg
Help
Entry
EUTSA_v10009915mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10009915mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10009915mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10009915mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10009915mg
Coactivators
SAGA/TFTC/STAGA complex
EUTSA_v10009915mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
EUTSA_v10009915mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Calc_CGRP_IAPP
Motif
Other DBs
NCBI-GeneID:
18992293
NCBI-ProteinID:
XP_006415735
UniProt:
V4L2X0
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MDHSILKLLEEDEDESMHSRDELDAHMDSLNREIEGENNSSSQQLGKGINGIGDADTNFH
IRESSQMIEQHRSGLVNQNHELKQEYESHPQHNPSQDLRQADQLWENPSYVLQGSNLQSK
NKPISSEPEMPQPQYLEIQKTSSQCAHGTEQPVHPVNHGPKEVQVCELLRVLIAQVDKDR
EKHLRTLFCKFKVGLYVHEMTWHSDRKLSLHYFSFLTCLQRKELTKESFLRYVRDAVGDQ
MIRLATRNLLQSEQVSNVPMKQSNGNPRTSTDDLGKQSSKMVLSTSTTHESFVSPSMKTQ
MDSSIMVNIPAPSRTINVRTTPKMPYVGQKKPFEALGSSLPPSSKKQKLRGDYDDRSIEQ
INDVTALINLQEEERKLLYSGAKEDSRVSKASRRAVHEEEERTILQKNPLQRKLAVIMAK
SGVEHINDDVEQCLSLCVEERMRGLLSDIIRMSKQRTDAPKCRNRTCITSDIRKQINEMN
QKVKEEWETKHGGKRQNEGNDTAKEDTRSEQMKRFYNNKEQDERRIKVANVAALASIGGD
NPFLKWKLMVEARQKLSSRSEIISKNETGGRRFGKNQGSPKVARSISVKDVFAVVEKEPQ
MSKSTLLYRLYNRICSDVPTQEKT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatcactccattttaaagctcctcgaagaagacgaggatgaatctatgcattcgagg
gatgaattggacgcacacatggactctctgaatcgagaaatcgaaggagaaaacaattct
tcgagtcagcagcttggaaaagggattaatggtattggagatgctgataccaacttccat
atccgtgagagcagtcagatgatagagcaacaccgatctggtttggtcaatcaaaaccac
gagttaaagcaagaatatgaatctcatccacagcacaatccatctcaggaccttcgtcaa
gcagatcaactctgggagaatccttcctatgttcttcaaggaagtaacttgcagtctaaa
aacaaacctattagcagtgaaccagaaatgccgcaacctcagtatttggaaatacagaag
acgagtagccaatgtgctcatggaacggaacagcctgttcaccctgtgaatcatggccct
aaggaagtacaagtttgtgaattgcttcgtgtcttgatagcccaagttgacaaagataga
gagaagcatcttcgtaccctgttttgtaaattcaaggtggggctttacgtccatgaaatg
acttggcactctgatagaaaactctcactacattacttttcttttctcacttgtttgcag
aggaaagaattgacaaaggaaagcttcttacgatatgtgagggatgctgtaggtgatcaa
atgatcagattggcaactaggaatctgcttcagtcagaacaggtatctaatgttccaatg
aaacagagcaatggtaacccaaggacgtcaactgatgacttggggaagcagtcttctaaa
atggttttatccacatcgaccacccatgaaagctttgtttctccgtcaatgaaaacacag
atggactctagcataatggttaatatccctgccccatctcggaccattaatgttaggacg
acacccaaaatgccttatgttggtcagaagaaaccttttgaggcactaggttcttcgctg
ccaccatcgagcaagaagcaaaaactacgtggggattatgatgatcgaagtattgaacaa
atcaatgatgtcactgcactcatcaatcttcaggaagaagagagaaaactattatactct
ggggctaaagaggacagtcgtgtttctaaagcatctcgaagagctgtgcatgaagaggaa
gaaaggacgattttgcagaaaaatccactgcagagaaagctagcagtaattatggcaaaa
agtggtgtagagcatataaacgatgatgtcgaacagtgcttgtctctgtgcgtggaggaa
aggatgcgtggattgttgtctgatataatccgaatgtcaaagcagcggactgatgctccg
aagtgtagaaatcgaacttgtatcacatctgatattcggaaacaaattaatgaaatgaat
cagaaggtcaaagaggaatgggaaacgaaacatggtggaaagcgtcagaacgaaggaaat
gatactgcaaaagaagatactcgttcagaacaaatgaagaggttctataataataaggaa
caagatgaaaggagaattaaggttgcaaatgttgctgcccttgcatccattggaggagat
aatccgtttctaaaatggaaacttatggtagaagcacgtcagaaactttcttcacggtca
gaaataatctccaagaatgaaactggtggtagaagatttgggaagaaccaaggttcacca
aaagtggcccggtcaatatctgtgaaggatgtgtttgctgtggtggaaaaagagcctcag
atgtctaaatcgacgctactgtatcgcttatacaacagaatctgctcggatgttccaacc
caagagaagacatag
DBGET
integrated database retrieval system
