Eutrema salsugineum (saltwater cress): EUTSA_v10010052mg
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Entry
EUTSA_v10010052mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10010052mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
EUTSA_v10010052mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
HEAT_ECM29
TPR_Trm732_C
HEAT_2
ResIII
TPR_TNPO3_IPO13_3rd
HEAT_GCN1
UTP20
Motif
Other DBs
NCBI-GeneID:
18021181
NCBI-ProteinID:
XP_006403594
UniProt:
V4LRG6
LinkDB
All DBs
Position
Unknown
AA seq
2044 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQSTRLTAARQIGDIAKSHPQDLSSLLRKVLHYLRSKKWD
TRVAAAHAIGAIVLNVKHTSLSELLNSLATKLGEAGISGNVDEVVASGNLQSKLLANAPF
RSFEMNKVLEFGALLASGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNE
MIGDEDLIEEKSNVHANGVGNRLYANYSPHHIQQFVSRMVPRVNSKRPSARELNLLKRKA
KMSSKDQAKVSCEGADVEMSSSHASTSKRTLSDSLDSNKANVGNEDDIEPDGDGRWPFHS
FVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTAEFSSDNGFESKEVLNTVTRE
REIDLNMQLSENELEPLRKRLKTEDPSKSFIDNTVLEVMGSDYDIDVKNENVEYLLPPVQ
VNGQIDSSSTKMEPQSSIDASSQSEINHVAEVSNHSEDTSFVEEAVIPNKHQKENIEGLD
LVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYMS
PSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLSYILPACKAGLEDSD
DDVRAVAADALIPAAAAIVSLRGQTLLTIVMLLWDILLELDDLSPSTSSVMNLLAEIYSQ
DDMTLVMHEELSVGDEQNIDLNGRVHVETIRERRDVKESPYALSALAPRLWPFTRHDITS
VRFSAIRTLERLLEAGCRKNIPEQSKISSWPSSILGDTLRIVFQNLLLESTEEILECSER
VWRLLVQCPVGDLEEAAKSYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKMK
AVQLESEASSILGFDYARNSASLEKNEDASARSTKITVGSDMEMSVTRTRVVTASALGIL
ASRLSEGSMNFVVDPLSSTLTSLSGVQRQVASIVLISWFREIKCKVPSDGSGSFPGFPSP
LKKWMLDLLACSDPAFPTKDILLPYAELSRTYTKMRNEASQLLHTVENCHCFDKLLSTTK
LNVESLSADETIEFASTLALWNKDSAGNESLEKQVYEDVESSRQQLLSTAGYLKCVQSNL
HITVTSLIAAAVVWMSEFPARLNPIILPLMASIKREQEQILQQKAAEALAELISYCVNRK
PSPNDKLIRNICSLTCMDPSETPQASIISSIDIVDDLDFLSSRSNAGKQKAKVVLAGGED
RSKVEGFITRRGAELALKHLSVKFGGSLFDKLPKLWECLIEVLVPGNPSDQQNIDLRIES
VSDPQLLINNIQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAK
SMTTNVMAAVVENAIPMLGDLTCINARQGAGMLIGLLVQGLGVELVPYSPLLVVPLLRCM
SDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDY
KLCTDLKVTLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGST
DEPDIFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYIGSAQDRVSLREQFNNHNVIIT
SYDVVRKDADYLTQFSWNYCILDEGHIIKNAKSKITSAVKQLKAQHRLILSGTPIQNNIM
ELWSLFDFLMPGFLGTERQFQASYGKPLVAARDPKCSAKDAEAGVLAMEALHKQVMPFLL
RRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHAKQEISSIIKVDGSADSGNVDA
APTKASTHVFQALQYLLKLCSHPLLVLGEKITESVASDLSAMMNGCSDIITELHKVQHSP
KLVALQEILEECGIGSDASSSDGTLNVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYM
RLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQ
AMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQRFKVSVANTVINAENASMKTMNTDQLL
DLFASAETSKKGGASSNKGSEDSDQISGTGKGLKAILGNLEELWDQSQYTEEYNLSQFLA
KLNG
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaacaatcttcgcgactcaatcgtctccttacactgttggacactggttca
acgcaatctactcggcttactgcagccaggcagatcggagatattgcaaagtctcatcct
caggacttgagctctcttttgagaaaggttttgcattacctccgtagtaaaaagtgggat
acgagggttgctgctgctcatgctattggtgccattgttctgaatgtcaagcatacttca
ttgagtgaactcttaaattcgttggcaacaaagttgggtgaggccgggatatctggtaat
gtagatgaagtggtggcttcaggaaatcttcagtccaaacttctagcaaatgctcccttc
agaagctttgagatgaataaagtcttagaatttggcgctttgctggcgtctggtggacag
gagtacgacattttgaatgacaattccaagaatccaagggaccgagtggctcgtcagaaa
aagaatctccggcgacgtttaggtttggacatgtgcgagcagtttatggatgtcaacgaa
atgattggagatgaggatcttattgaagagaagtctaatgttcatgcaaatggggttgga
aatagattatacgcaaactattctccacatcatattcaacaatttgtttcaagaatggtt
ccccgtgtcaattctaagaggccaagcgcaagggaattgaatttattgaaacgtaaagca
aaaatgagctccaaagatcaagctaaagttagctgcgaaggagcagatgttgagatgtca
tcgtctcatgcttcaacctcaaaaagaactctgtctgactcattggactctaacaaggca
aacgttggtaacgaagatgatattgagcctgatggggatggaagatggcctttccacagt
tttgttgagcaacttattcttgacatgtttgaccctgcatgggagatccgccatggcagt
gttatggctctgagagaaatattaatgcttcatggtggttctgctggagtgtcaacagca
gagtttagctcggataatggttttgagtcaaaagaagtcttgaatacagtaacacgagag
agagaaatcgacttgaatatgcagctttcagaaaatgagcttgagccacttcggaaaaga
cttaagacagaggatccatcaaaatcatttattgataacacagttttggaggttatgggg
agtgactatgatattgatgttaaaaatgaaaatgttgagtatttactgccgccagtgcag
gtcaatggtcaaattgactccagttctacgaaaatggaacctcaatcttctattgatgca
tcatctcagtctgaaataaatcatgtggcagaggttagcaatcactctgaagatacgagt
tttgttgaggaagctgttatccctaataagcatcagaaagaaaatatcgaagggttggat
ttggttaaacaagccaggcattcttggatcaaaaattttgaatttctccaggattgcacc
attcgtttcttatgtgtactttctcttgaccgttttggggattatatttctgatcaggta
gttgctcctgtgcgggaagcgtgtgcccaagcacttggtgctactttcaaatacatgagt
ccctcgttaatttatgagacattaaacatcttgcttcagatgcagcgccggcctgagtgg
gaaattcgtcatgggagtcttttgggcatcaagtacttagttgctgtgcgacaggaaatg
ctccaagatttgcttagctatattcttccggcgtgtaaagcagggttggaggattctgac
gatgatgtgcgagcggttgctgcggatgcacttataccggcagcagctgctattgtttct
ttgagaggacagacattacttaccattgtcatgctactgtgggatatcttgcttgagttg
gatgacttaagtccatccaccagcagtgttatgaacctcctggcagagatctattctcaa
gatgacatgacccttgtgatgcatgaggaattatcagtgggggatgaacaaaatattgac
ctcaatggaagggttcatgtcgagactattagagaaagaagagatgtcaaggaaagccca
tatgcattatcagctttagcccctaggttgtggccatttacgagacatgacatcacatca
gttcgattttctgctattcgaactctggagcgactacttgaagctggatgcagaaaaaac
attcctgagcagtccaaaatttcttcttggccatcgtcaatattaggggacaccctgaga
attgtctttcagaatcttttgcttgaatcaactgaggaaattctggagtgttcggagagg
gtgtggaggcttttggttcagtgcccagtgggagatttagaagaagctgcaaaatcatac
atggcttcgtggatagaacttgcagctactccttatggctcaacattggatgctacaaaa
atgttttggccagtagcacctcctcgtaagagtcattttaaagctgctgctaagatgaaa
gctgtccaacttgagagtgaagcttccagcattctgggctttgattatgcaagaaattct
gcttccctagaaaaaaatgaagatgcttctgccaggtccactaaaattactgtcggctct
gatatggagatgtcagtgactcgcacccgggtagttacagcatctgcgttaggtatcctt
gcatcccggttgagcgagggttcaatgaactttgtggtagatccactgagtagtactctt
acttctttgtccggtgttcagcgccaggttgcgtccattgtgcttatctcttggttcaga
gaaatcaaatgcaaggtcccttccgatggaagtggaagttttcctggttttcctagtcct
cttaaaaagtggatgctagatttgctagcttgctcagaccctgctttccctaccaaagac
atactacttccttacgctgagctctccagaacttacactaaaatgaggaatgaagcttct
cagttgttacatacagttgaaaactgccattgttttgataagttattgtcaacgactaaa
ctcaatgtggagagcttgagtgctgatgagacaattgaatttgcatcaacactagctttg
tggaataaagacagtgctggaaatgaatccttagaaaagcaagtttatgaagatgtggag
tcatctaggcaacaactgctaagtactgctggttatttaaaatgtgtccagagtaatcta
catatcacagtcacctccctgatcgctgccgccgttgtttggatgtcagaatttcccgct
agacttaatccaataatcttgccactgatggcttcgattaaaagagagcaggaacaaata
ctacagcagaaagctgctgaggctcttgcagagcttatttcttactgtgttaatagaaag
ccaagccccaatgacaagttaatcaggaatatttgtagcttgacgtgcatggatcctagc
gaaacacctcaagctagtatcattagctctatagatatcgttgatgatctggacttcctg
tcttcgcggagtaacgcaggaaaacaaaaggcaaaagtcgtgttggctggtggcgaagac
aggtctaaagttgagggttttataactaggagaggagctgaacttgcattaaagcattta
agcgtgaaatttggtggttccttatttgacaagctcccgaaattgtgggagtgcctcatt
gaggttcttgttcctggaaatccttcagatcaacagaatattgaccttagaatagaatct
gtctctgatccacagctcttgataaacaacatccaggtggtacgttcaatagcaccagtg
atggaagaaacactgaagcctagactactcagtctcctgccttgtattttcaaatgcgtt
cgccattcccatgtggctgttagattggctgcttctagatgtgttatgacaatggctaaa
tcaatgacaacaaatgtcatggcagcagtagtggaaaatgctattccaatgttgggagat
ttgacgtgcattaatgccagacaaggcgcaggaatgcttattggtttgcttgttcaggga
ctgggtgtagaactggttccatattctcctttattggttgttccactcctgagatgcatg
agcgacgttgacagttcagtcaggcagagcgtgacacgtagctttgctgcccttgtacct
atgcttccattagcacgtggggttccccctcctgtagggttgagcaaagatttatccagt
aatgcagaggatgccaaatttttggagcagctacttgacaactcccatatagatgattac
aagctttgtactgacttaaaagttacattgagaaggtatcaacaagaaggaatcaattgg
ttaggattcctaaaacgttttaagctccatggaattctctgcgatgatatggggcttggt
aagacacttcaagcatctgcaattgtggcatctgatgcagcagagcgtcgtggttcaact
gatgaaccagatatttttccatctataattgtttgcccttcaacactagttggccattgg
gcgtttgaaattgagaagtatatcgacctttctctgctaagcgtattgcagtatattggc
tctgctcaagaccgcgtttctcttcgtgaacagtttaacaaccacaatgtcattatcaca
tcttatgatgtggtccggaaggatgctgattatctgacacagttctcatggaactattgt
attctggatgagggacacataattaagaatgctaaatctaaaattacttcagccgtgaaa
caattgaaggcccagcaccggcttatccttagtggaacgccaatacagaataatatcatg
gagctttggtcgctttttgactttttgatgcctggatttcttgggaccgagagacagttt
caagcatcttatggaaaaccgttggtggcagctagagatcctaaatgttcagctaaggat
gctgaagcgggtgtactggcaatggaagcactccataagcaggttatgccattcttattg
cggcgtacaaaagaagaagtcctctctgatttgccagaaaaaatcatccaggacagatac
tgtgaccttagtcctgtccagctgaaactttatgagcaattttctggttcacatgctaag
caagaaatatctagtatcataaaagttgatggatcagcagattctggcaatgtggatgct
gcgccgacaaaagcatccacacacgttttccaggcactgcagtacctgcttaaactctgc
agtcatccgcttcttgttcttggcgaaaagattacagagtcggtggcttctgatttgtca
gcaatgatgaatggatgttcggacattatcactgagcttcataaagttcaacactctcca
aagcttgttgctcttcaggaaattttagaagaatgtggaataggttctgatgcttctagt
tcagatggcactcttaatgtagggcagcacagagttctgatatttgcacagcacaaagct
ttgctggacatcattgaaaaggacttgtttcaagcccacatgaaaagtgtcacatatatg
cgactggatggttcagttgtaccggagaaaagatttgagattgtgaaggcttttaattca
gatcctacaattgatgttctgctcctgacaacacatgttggtggacttgggttgaacctg
acctctgctgacacacttgtatttatggagcatgattggaatcctatgcgtgatcatcag
gcgatggatagagcgcatagattgggacagaagagagttgtaaatgtacaccgtctaata
atgcgtggcacacttgaagaaaaagtgatgagtctccaaagattcaaagtgtcggttgcc
aatacagtaatcaatgctgagaatgctagtatgaagacaatgaacactgatcagttgctc
gacttatttgcttcagctgaaacttcgaaaaagggtggtgcgtcttcgaataagggatca
gaggatagtgatcagattagtggaactggaaaaggactgaaggcaattctgggtaaccta
gaggaactgtgggatcaatcacagtacacagaagaatacaatcttagccagttcttagct
aagctaaacgggtag
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