Eutrema salsugineum (saltwater cress): EUTSA_v10010079mg
Help
Entry
EUTSA_v10010079mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10010079mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10010079mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
EUTSA_v10010079mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
18021272
NCBI-ProteinID:
XP_006404471
UniProt:
V4LQ43
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MKKPFPNEIEIISDSESETKARKLFEEGSRVLDSTSEDKDGESESEEEEERSEDSEYNNT
KDEIMVESLSSSSSSSSSFSSSDDESNIKEVVGDTDDDNLRRGCTPVKKVSKVGRKPLGR
YKKTGSCSTKPRKHNTNIQKPNHRDEEEKFQTNLRKEEKKIQKLDLREKKERQERVTKQC
NNPMFICTHCGKENTEILDSHSSFTRRHATTKAEDDDLSKPSASIPDIVNSEKAKEVGAP
EKPSRPEIQSLLTQKDLQTNNIVGSSMPTVAEGLNTFTFPNEPIDNESASYISSGDESGY
ESEPSLKDKEVKSNNNSGWRMMDGSHKEVDLFRLLVNSVWDKDRLGEEEEEGEDKLVSSP
EDQSEEQDQRKYDKDGLLIIRPPPLIMRFGVEEPQSPSEISESDKEEARLWEDMAFYSKT
NNIGIQPHSEIEKEISTDETPAACCKKGNHELCLDLEIGLKCMHCGFVEREIRSIDASEW
GEKNTSGRRKVDRSEEDGTSSFIGTLDFEAPSKNNSNDGCVSTEGTVWDKIPGIKSQMYP
HQQEGFEFIWRNLAGTIVLNELKKFENSDETGGCIMSHAPGTGKTRLTIIFLQAYLECFP
NCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKENPAALRLMMQKNSSARSNN
EIRMVKIYSWIKSKSILGISYNLYEKLAGVKDEDKKTKTMRLDKELEDIREILMGMPGML
VLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFQELCNVLGLARPKYLERLTST
LKKSGMTVTKRGKRALGNEINNRGIEELKTVMLPFVHVHKGSILQKSLPGLRECVVVLNP
PELQKRVLESIEVTHNQKTKNVFETEHKLSLVSVHPSLVSCCKLTGKERLTIDEALLAQL
KKVRFDPNQSVKTRFLMEFIKLCEVINEKVLVFSQYIDPLKLIMKHLVSRFKWIEGEEVL
YMHGKLEQKQRQTLINEFNDPKSKAKVLLASTKACSEGINLVGASRVILLDVVWNPAVER
QAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSRHDKGKEKIVE
AVTEDKVLDTMVQNLKLGDMFDNLIVQPKEADLVDGFSILMP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaccatttcctaatgaaatagagatcatttcagattctgagtctgaaaccaaa
gcgaggaagctttttgaggaaggaagcagagtcttagactccaccagtgaagacaaagat
ggcgaaagtgagagcgaggaagaggaagaaagaagtgaagatagtgaatacaataacacc
aaagatgagataatggtggaatctttgtcttcatcgtcatcatcatcttcatctttctcc
tctagtgatgatgaatccaacataaaggaggtagttggagacacagatgatgataatttg
agaaggggttgtacaccagtcaagaaagtgtctaaagttggaaggaagcctttgggaagg
tataaaaagactggttcttgctcaaccaagcctagaaaacataacactaatattcagaaa
ccaaaccaccgagacgaagaagagaaatttcaaaccaatcttagaaaagaggaaaagaag
attcagaagttagaccttcgagaaaaaaaagaacgacaagaaagagtaacaaagcagtgt
aacaatccaatgttcatttgtactcactgtggcaaagagaacacagaaattcttgattca
cacagctctttcaccagacgacatgctacaacaaaagctgaagacgatgatttatcaaag
ccatccgcatccataccagatattgtgaattcagagaaagcaaaagaggtcggagcacct
gaaaagccatcaagacctgaaatacagagtttactgacacaaaaagatttacaaaccaac
aacatcgtggggtcgagtatgccaacagttgcagaaggattaaatacgtttacttttcct
aatgaaccaattgataatgagtctgcttcttatatcagctctggagatgaatctggatat
gaatctgagccttcactaaaagacaaagaggtcaagtctaataacaactcggggtggaga
atgatggatggaagccataaagaagttgatcttttcaggcttcttgtaaactctgtttgg
gataaagatcgattaggtgaagaagaggaagaaggagaagacaaactggtttcttcacct
gaagaccaatctgaagaacaagatcaaagaaaatatgataaagatggacttctgatcatt
aggccaccaccattgataatgagatttggtgtagaggaacctcaatcaccatctgagatt
tctgagtcggataaagaggaagctaggttgtgggaagatatggcgttttacagcaaaaca
aacaacattggcatccagcctcattcagagattgagaaagaaatatcaactgatgaaaca
ccagcagcatgttgtaaaaaaggaaatcacgaattgtgtctagatcttgagatcggttta
aagtgtatgcattgtggctttgtggagagagagatccgaagcattgatgcatctgaatgg
ggagaaaagaacacaagtggaaggagaaaggttgatagatctgaagaggatggaactagc
agcttcattgggacacttgactttgaagctcctagcaagaacaactcaaatgatggatgt
gtttctactgaaggaactgtttgggataagattccagggatcaaatctcaaatgtatcct
caccagcaagagggttttgagtttatctggaggaacttagctggtactattgtgttgaac
gagctcaaaaaatttgagaacagcgatgaaaccggaggatgcatcatgtcacatgctccc
gggacagggaaaactcgtctgaccattattttccttcaagcttacttggaatgcttccct
aattgcaaaccagtgatcattgctcctgcaagcttgcttctcacatgggcagaggagttt
aagaaatggaacataagcattccctttcataatcttagcagtttggatttcactggcaaa
gagaacccggcggcgttgagacttatgatgcaaaagaattcgagtgcgagaagcaataat
gagataaggatggtgaagatatactcttggataaaatcgaagagcatacttgggattagc
tacaacctctatgagaaacttgcaggagttaaagacgaggacaaaaagactaagacaatg
agactagacaaagaattagaggatatcagagaaatacttatggggatgcctggaatgctg
gttcttgacgaggcacacacgcctcggaaccagagaagttgtatatggaaaacactatcc
aaagtggaaacacagaaacgtattttgctttctggaacacctttccagaataacttccaa
gagttgtgcaatgttttgggacttgcaaggcctaagtatctggagaggctcacatccaca
ctcaagaagagtgggatgactgtaacgaaaagaggaaaaagagctttgggaaacgaaatc
aacaaccgagggatcgaagaacttaagactgttatgcttccatttgtgcatgttcataaa
ggaagcattcttcagaaaagcctccctggtttgagagaatgtgttgtggtgttaaaccca
cctgagctgcagaaaagagtcttagaatccatagaagtcacccataaccagaaaacaaaa
aatgtgtttgaaaccgaacacaagctatctctagtctcagtccatccttctcttgtctct
tgctgcaaactgactgggaaagaacgtttgaccattgacgaggctttgcttgcacaacta
aagaaggtaagatttgatccaaaccaaagtgtgaaaacaagattcctcatggagttcatc
aagttgtgcgaagtgataaatgagaaagtgctggtcttcagccaatacattgacccttta
aagctgataatgaaacatctggtctctcggttcaaatggattgaaggggaggaagtgttg
tacatgcacggaaaactcgagcaaaaacaaagacaaacattgatcaacgaattcaatgat
cccaaatccaaggccaaagtgttgttagcttcaacaaaagcatgttctgaagggatcaat
ctggtaggagcatcaagggtgattcttctggatgttgtatggaatccggcagtcgaaaga
caagctataagccgtgcttacaggatcgggcagaagcggattgtttatacgtatcacttg
gttgcaaaaggaactcctgaaggaccaaagtactgtaagcaagcacaaaaggatagaatc
tcagagctggtttttgcatgttcttcgagacatgacaagggcaaagaaaagattgttgaa
gctgtgacagaggacaaagtgttggacactatggtgcagaatctgaagcttggggatatg
tttgacaaccttattgtccaaccaaaggaagcagatttagttgacggtttcagcatactt
atgccttga
DBGET
integrated database retrieval system
