Eutrema salsugineum (saltwater cress): EUTSA_v10010089mg
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Entry
EUTSA_v10010089mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11293
protein HIRA/HIR1
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10010089mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
EUTSA_v10010089mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_IFT140_2nd
eIF2A
Beta-prop_DCAF12
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
18021257
NCBI-ProteinID:
XP_006404455
UniProt:
V4M123
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MIAEKPVWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDTDLQNLDPKERLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVIQIHERKPGSGTTEFGSGEPPDVENWKAVMT
LRGHTADVVDINWSPDDSMLASGSLDNTVHIWNMRSGICTTVLRAHLSLVKGVTWDPIGT
FIASQSDDKTVIIWRTSDWSLAHRTVGHWEKSLGSTFFRRLGWSPCGHFITTTHGYQKPR
HSAPVLERGEWSAAFDFLGHNAPIIVVKFNHSMFKRTTSSAPETKRAGWSNGTSKSGGKD
LQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVA
MIHFNPTELGVRLTDNELEELKKNRYGDVRGRQANLVESPAQLLLETVSTKLSGSKRAAS
DVQQNQVITKPSVNVENTAKKRKSQVDDRNKGAEATGDTLNKASTSNRVSNPVNQKVYRR
PDGRKRIIPEAVGVPQQENNIAVNGQSHNFLPAPSAAPGNRDSGDTPVETSNRDSSMKEI
MGRNPDLKERPRITARATITESLVIEKVPGTSGNDGILNVEQSVGIKGSSSTDLLIRVFD
WKEGETTAPVCLEACPKEHALDTVGAVSTSMIKETEISCKRSGETLWSDRIMGRVTVLAG
NPNFWAVGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDSDDSWKLLLVTRKGSIYVWDLF
NRKCILHDSLASLVSSDTKLSSTVAGTIKVISVKLSKSGSPLVVLATRHAFLFDTSLMCW
LRVADDCFPSSNFSSSWNLGSAPCGELAGLQVDVRKYMARKPGWNRITDDGMQTRAHLES
QLASSLALESPSEYRQCLLAYVRFLAREADESRLREVCESFLGPPTGMAEAATSDTNLSW
DPYVLGVKKHKLLRNDILPAMASNRKVQRLLNEFMDLLSEYENTEPADAIPKGSAPTIDC
GGVPSSLDQMDSDPPAVTATTPLTIDNEKQVSLGNSAALETGIVCEETGSEDQEKHDQNS
RDQGS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaaacccgtttgggttaaacatgaagggttgcagatattctccattgat
gttcaacccaacggagaaaggtttgccacaggcggtggtgaccacaaggtccggatatgg
aacatgaagtctgttgacacggatttgcaaaacttagatccaaaagagaggcttctcgca
actcttcgtgatcactttgggtcagtcaactgtgttaggtgggccaagcacggtaggtac
gtggcatctggttctgatgatcaagttattcaaattcatgagaggaagcctggttcaggc
accactgagtttggtagtggagaacccccggatgttgagaactggaaagctgttatgact
ctaaggggacacacggccgatgtggtggatattaattggtctccagatgactcaatgctt
gctagtgggagtttggacaacacggtccatatatggaatatgcgcagtggtatttgcact
actgttctcagagctcacttgagcttggtgaaaggtgtgacctgggatccaatagggaca
tttattgctagccaatcggatgacaaaactgtgataatatggcgaacaagcgattggagc
ttggctcacagaacagttggtcattgggaaaaatcgctcggatccacatttttcaggcga
cttggttggtcaccctgtggccacttcattactaccactcacgggtatcagaagccaagg
cattctgctcctgttttagaaagaggagaatggtctgcagcatttgacttcttaggtcac
aatgctcctatcattgttgtgaagttcaatcattcaatgtttaaaagaaccacttctagt
gcccccgaaacgaaacgagctgggtggagcaatgggacttcaaaatcagggggaaaagat
ttgcagccatataatgtcattgcaatagggagtcaagaccgcactataaccgtgtggaca
actgcaagtccacgccctctttttgtcgcaaagcatttctttggccaaagtgttgtggac
ttatcatggagtcccgatggatattcactttttgcatgttctttggacggaacagtggcg
atgattcactttaatccaacagaactaggtgtcaggctaacagataatgaactcgaagag
ctgaagaaaaatcgatatggagatgtaagaggacgacaagcaaacttagttgagagccca
gctcagttattacttgaaacagtctctacaaagctctccggtagcaagagagcagcatca
gatgttcaacaaaatcaggttataacaaaaccttctgtgaacgtggagaacactgcaaag
aagcgtaaatctcaagtcgatgatcgaaacaagggagcagaggctactggtgacacattg
aataaagcgtcaacctcaaatcgggtatctaatcctgtgaatcaaaaagtgtatagaagg
cctgacggaagaaaaaggatcattcctgaagccgttggagttcctcagcaggagaataat
atcgctgttaacgggcaatcccataattttctgcctgctccttctgctgctcctggtaat
agagatagcggagatactcctgtggagactagcaatagggattcatccatgaaagagata
atgggcaggaaccctgatctcaaagagcgtccaaggattacagcccgtgctaccattact
gagagccttgttattgagaaagttcctggaacctctggtaatgatgggattttaaatgtg
gagcaatctgtaggtataaagggatcttctagcacagatctattgataagggtgtttgat
tggaaagaaggggaaaccacggcacctgtttgcttagaagcttgtccaaaggagcatgct
ttggacactgttggtgcagtaagtacatccatgatcaaggaaactgagatttcctgcaaa
agatcaggtgaaactctctggtctgataggattatggggagagtcacggttttggctgga
aatccaaatttttgggctgttgggtgcgaagatggaagcctccaagtttacacaaagtgt
ggaaggcgtgctatgcctactatgatgatgggatctgctgcaacatttatagatagtgac
gatagctggaaattgctgcttgtcacaaggaaaggatctatttatgtgtgggatctattc
aataggaaatgcatcctccatgactctttagcatctttggtctcttctgataccaagtta
tcttccacagtagcaggtacaataaaagtcatatctgtgaaattatccaaatctggttct
ccacttgttgttctagccacacgtcatgcattcctctttgacacgagtctaatgtgctgg
ctgagagtggctgatgactgcttcccgtcctcaaatttcagtagctcctggaatttgggc
tcagctccatgcggcgagcttgctggtttgcaggttgatgtgagaaagtacatggccaga
aagccaggatggaataggataactgatgatggtatgcaaacacgtgcacatttggaatct
caacttgcatcctctcttgcgttggagtctcctagcgagtaccgccagtgcctcctcgcc
tatgtgaggtttctagcaagagaggcagacgagtcaagactaagagaagtgtgcgagagc
tttcttggacctccaactggtatggctgaagcagcaacctcagacacaaacttgtcttgg
gatccttatgttctgggggtgaagaagcataaacttttgagaaacgatattcttcctgct
atggcgtcaaacagaaaggtgcagcgtctgctcaacgagtttatggatctcttatccgaa
tatgaaaacacagaaccagcagatgccatccccaagggctcggcgcctaccatagactgt
ggtggagtcccatcttcactggatcaaatggactctgatcctccagccgtgacagctacg
actccattgacaatagacaatgaaaaacaggtttctctggggaattctgcggctttggag
acaggtattgtatgtgaggaaacgggttctgaagaccaagaaaaacacgaccagaattca
agagaccagggctcttga
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integrated database retrieval system