KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10010089mg
Entry
EUTSA_v10010089mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11293  protein HIRA/HIR1
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10010089mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     EUTSA_v10010089mg
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD_LRWD1 WDR90_beta-prop_4th Beta-prop_IFT140_2nd eIF2A Beta-prop_DCAF12 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 18021257
NCBI-ProteinID: XP_006404455
UniProt: V4M123
LinkDB
Position
Unknown
AA seq 1025 aa
MIAEKPVWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDTDLQNLDPKERLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVIQIHERKPGSGTTEFGSGEPPDVENWKAVMT
LRGHTADVVDINWSPDDSMLASGSLDNTVHIWNMRSGICTTVLRAHLSLVKGVTWDPIGT
FIASQSDDKTVIIWRTSDWSLAHRTVGHWEKSLGSTFFRRLGWSPCGHFITTTHGYQKPR
HSAPVLERGEWSAAFDFLGHNAPIIVVKFNHSMFKRTTSSAPETKRAGWSNGTSKSGGKD
LQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVA
MIHFNPTELGVRLTDNELEELKKNRYGDVRGRQANLVESPAQLLLETVSTKLSGSKRAAS
DVQQNQVITKPSVNVENTAKKRKSQVDDRNKGAEATGDTLNKASTSNRVSNPVNQKVYRR
PDGRKRIIPEAVGVPQQENNIAVNGQSHNFLPAPSAAPGNRDSGDTPVETSNRDSSMKEI
MGRNPDLKERPRITARATITESLVIEKVPGTSGNDGILNVEQSVGIKGSSSTDLLIRVFD
WKEGETTAPVCLEACPKEHALDTVGAVSTSMIKETEISCKRSGETLWSDRIMGRVTVLAG
NPNFWAVGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDSDDSWKLLLVTRKGSIYVWDLF
NRKCILHDSLASLVSSDTKLSSTVAGTIKVISVKLSKSGSPLVVLATRHAFLFDTSLMCW
LRVADDCFPSSNFSSSWNLGSAPCGELAGLQVDVRKYMARKPGWNRITDDGMQTRAHLES
QLASSLALESPSEYRQCLLAYVRFLAREADESRLREVCESFLGPPTGMAEAATSDTNLSW
DPYVLGVKKHKLLRNDILPAMASNRKVQRLLNEFMDLLSEYENTEPADAIPKGSAPTIDC
GGVPSSLDQMDSDPPAVTATTPLTIDNEKQVSLGNSAALETGIVCEETGSEDQEKHDQNS
RDQGS
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgattgcggagaaacccgtttgggttaaacatgaagggttgcagatattctccattgat
gttcaacccaacggagaaaggtttgccacaggcggtggtgaccacaaggtccggatatgg
aacatgaagtctgttgacacggatttgcaaaacttagatccaaaagagaggcttctcgca
actcttcgtgatcactttgggtcagtcaactgtgttaggtgggccaagcacggtaggtac
gtggcatctggttctgatgatcaagttattcaaattcatgagaggaagcctggttcaggc
accactgagtttggtagtggagaacccccggatgttgagaactggaaagctgttatgact
ctaaggggacacacggccgatgtggtggatattaattggtctccagatgactcaatgctt
gctagtgggagtttggacaacacggtccatatatggaatatgcgcagtggtatttgcact
actgttctcagagctcacttgagcttggtgaaaggtgtgacctgggatccaatagggaca
tttattgctagccaatcggatgacaaaactgtgataatatggcgaacaagcgattggagc
ttggctcacagaacagttggtcattgggaaaaatcgctcggatccacatttttcaggcga
cttggttggtcaccctgtggccacttcattactaccactcacgggtatcagaagccaagg
cattctgctcctgttttagaaagaggagaatggtctgcagcatttgacttcttaggtcac
aatgctcctatcattgttgtgaagttcaatcattcaatgtttaaaagaaccacttctagt
gcccccgaaacgaaacgagctgggtggagcaatgggacttcaaaatcagggggaaaagat
ttgcagccatataatgtcattgcaatagggagtcaagaccgcactataaccgtgtggaca
actgcaagtccacgccctctttttgtcgcaaagcatttctttggccaaagtgttgtggac
ttatcatggagtcccgatggatattcactttttgcatgttctttggacggaacagtggcg
atgattcactttaatccaacagaactaggtgtcaggctaacagataatgaactcgaagag
ctgaagaaaaatcgatatggagatgtaagaggacgacaagcaaacttagttgagagccca
gctcagttattacttgaaacagtctctacaaagctctccggtagcaagagagcagcatca
gatgttcaacaaaatcaggttataacaaaaccttctgtgaacgtggagaacactgcaaag
aagcgtaaatctcaagtcgatgatcgaaacaagggagcagaggctactggtgacacattg
aataaagcgtcaacctcaaatcgggtatctaatcctgtgaatcaaaaagtgtatagaagg
cctgacggaagaaaaaggatcattcctgaagccgttggagttcctcagcaggagaataat
atcgctgttaacgggcaatcccataattttctgcctgctccttctgctgctcctggtaat
agagatagcggagatactcctgtggagactagcaatagggattcatccatgaaagagata
atgggcaggaaccctgatctcaaagagcgtccaaggattacagcccgtgctaccattact
gagagccttgttattgagaaagttcctggaacctctggtaatgatgggattttaaatgtg
gagcaatctgtaggtataaagggatcttctagcacagatctattgataagggtgtttgat
tggaaagaaggggaaaccacggcacctgtttgcttagaagcttgtccaaaggagcatgct
ttggacactgttggtgcagtaagtacatccatgatcaaggaaactgagatttcctgcaaa
agatcaggtgaaactctctggtctgataggattatggggagagtcacggttttggctgga
aatccaaatttttgggctgttgggtgcgaagatggaagcctccaagtttacacaaagtgt
ggaaggcgtgctatgcctactatgatgatgggatctgctgcaacatttatagatagtgac
gatagctggaaattgctgcttgtcacaaggaaaggatctatttatgtgtgggatctattc
aataggaaatgcatcctccatgactctttagcatctttggtctcttctgataccaagtta
tcttccacagtagcaggtacaataaaagtcatatctgtgaaattatccaaatctggttct
ccacttgttgttctagccacacgtcatgcattcctctttgacacgagtctaatgtgctgg
ctgagagtggctgatgactgcttcccgtcctcaaatttcagtagctcctggaatttgggc
tcagctccatgcggcgagcttgctggtttgcaggttgatgtgagaaagtacatggccaga
aagccaggatggaataggataactgatgatggtatgcaaacacgtgcacatttggaatct
caacttgcatcctctcttgcgttggagtctcctagcgagtaccgccagtgcctcctcgcc
tatgtgaggtttctagcaagagaggcagacgagtcaagactaagagaagtgtgcgagagc
tttcttggacctccaactggtatggctgaagcagcaacctcagacacaaacttgtcttgg
gatccttatgttctgggggtgaagaagcataaacttttgagaaacgatattcttcctgct
atggcgtcaaacagaaaggtgcagcgtctgctcaacgagtttatggatctcttatccgaa
tatgaaaacacagaaccagcagatgccatccccaagggctcggcgcctaccatagactgt
ggtggagtcccatcttcactggatcaaatggactctgatcctccagccgtgacagctacg
actccattgacaatagacaatgaaaaacaggtttctctggggaattctgcggctttggag
acaggtattgtatgtgaggaaacgggttctgaagaccaagaaaaacacgaccagaattca
agagaccagggctcttga

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