Eutrema salsugineum (saltwater cress): EUTSA_v10010136mg
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Entry
EUTSA_v10010136mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EUTSA_v10010136mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10010136mg
Membrane trafficking [BR:
eus04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
EUTSA_v10010136mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
18021066
NCBI-ProteinID:
XP_006403931
UniProt:
V4LNN9
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MMIADDDEKWLAAAIAAVKQNAFYMQRAIDSNNLKDVLKFSAQMLSELRTSKLSPHKYYE
LYIRVSDELRKLEIFFMDETGRGCSISELYELVQHAGNILPRLYLLCTIGSVYIKSKDVT
ATDILKDLIEMCRAVQHPLRGLFLRSYLAQATSKKLPSIGSELEGDADTHMDALEFVLQN
FTEMNKLWVRMQHQGPTREKEKRERERKELRDLVGKNLHILGQLEGVDLGIYRDTVLPRI
LEQVVNCKDDLAQCYLMDCIIQVFPDDFHLETLDVLLGACPQLQPSVDIKTVLSGLMERL
SNYAASSVEALPNFLQVDAFSKLNHAIGKVVEAQVDLPASGSVTLYLFLLKFTLHVHSDR
LDYVDQVLGSCVGQLSATGKLRDDKASKQIVAFLSAPLDKYNDVVTILKLTNYPRVMEYL
DHETNKAMAIIIIQSILKNNTRIATADEVDALFELIKGLIKDFDETTDNDEVDEEDFQEE
QNSVARLVHMLYNDDQEEMSKIIFRVRKHVLTGGPKRLPLTIPPLVFSALKLVRRLRGGD
ENPFGDDTSATPKKILQLLNETVEVLSDVSASELAFRLYLQCAQAANDCELEAVAYEFFT
KAYLIYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRETLAHKATGYSAKLLKKPDQCR
AVYECAHLFWADDCENLKDGERVVLCLKRAQKIADAVQQMANASRGNSSTGSVALYVEVL
NKYLYFLEKGNPQVTGDTIQSLAELIRSETKKVESDAGSFISSTLRYMEFQRQQQDGGMS
EKYQKIKMEWFE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgccgacgacgatgagaagtggcttgccgccgccatcgccgccgttaagcaa
aatgctttctacatgcagcgcgcgatcgactccaacaatctcaaagacgttcttaagttt
tctgctcagatgctcagcgagcttcgtacttccaagctttctcctcataaatactatgaa
ctctatattcgagtttctgatgaactgaggaaattggagatcttctttatggatgaaacg
gggcgtggttgctccatttcagagctttacgagctagtgcagcatgccggtaacattttg
ccaagattgtatctcctctgtaccataggatctgtatatatcaaatccaaggacgttact
gccacggatatacttaaggatcttattgaaatgtgccgagctgttcaacatccattacgt
ggtcttttcttgagaagttaccttgctcaagctactagtaaaaagttacccagcattggt
tcagagctggaaggagatgctgatacacacatggatgctttagagttcgtgcttcagaat
tttactgagatgaacaaactatgggtccgaatgcaacatcagggacctactcgggagaag
gagaaacgggagagagaaaggaaggaattacgtgatcttgttgggaagaaccttcatata
ctgggtcagttggaaggtgttgacctcggaatttacagagatactgtccttcctagaata
ctggagcaggttgtcaactgtaaggatgatcttgcacagtgctacctaatggattgcatt
atacaagtctttcctgatgattttcaccttgaaactctcgatgtattattaggtgcttgt
ccacaacttcagccgtctgttgatatcaagacagtcctttcgggtctgatggaaaggctt
tcgaactatgctgcatctagtgtggaagcattgcctaatttcctgcaagtagacgccttt
tcaaagttgaatcatgctattgggaaggttgtagaagcacaggtggacttgccggcctca
ggatctgtaacattgtatttgtttcttctgaagttcactctccatgtccattccgatcgt
ctagactatgtggaccaagttttgggttcttgtgttggccaactctctgccacaggaaag
cttcgtgatgacaaggcatcaaaacagatcgttgcatttcttagcgctccgttggataag
tataatgatgttgtaactattttgaagcttaccaactatcctcgagtaatggaatacctt
gaccatgagacaaacaaagccatggcaattattataattcagagcattttgaaaaacaat
actcgcattgctaccgctgatgaggtcgatgctttgtttgaactgataaaaggacttatc
aaggattttgatgagacaactgataatgatgaggttgatgaagaagatttccaggaagag
cagaactctgttgcacggttggttcacatgctttacaatgatgatcaagaagaaatgtct
aagataattttcagagtaaggaagcacgtcctgactggaggacctaagcgtctgcctctt
acgataccaccccttgtcttttccgctctcaagttagttcggcgattacgaggtggagat
gaaaacccatttggagatgatacgtcagcaacaccgaagaaaattctacagctcttaaat
gagaccgtggaagttctatctgatgtttcagcgtctgagttggcatttcgactctacttg
caatgtgctcaggcagccaatgactgtgaattagaagcagtcgcttatgagttcttcaca
aaggcttatcttatatatgaagaagaaatttcagattcaaaggcacaagtaacagcactg
cgtttaataatagggacactccagcggatgcgtgtatttaatgttgagaacagagaaact
ctggctcacaaggcgacagggtactctgcaaaactccttaagaagccagatcagtgtaga
gctgtttacgaatgtgcgcatctcttctgggcagacgactgcgagaacctgaaagatgga
gagagggttgtgctttgcctgaagagggcgcaaaaaatcgcagatgctgttcaacaaatg
gccaacgcatcccgtggtaacagtagcaccggctctgtggctctatatgtcgaagtgctg
aacaagtatctctacttcttggagaaaggaaatccacaagtaacaggcgatacaatccag
agcttagctgaattaataagaagcgagacgaagaaagtagagtcagacgcagggtcgttc
atatccagcactctgcgttacatggagtttcagagacaacagcaggatggtggcatgagt
gagaaataccagaaaatcaaaatggaatggtttgaatga
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