Eutrema salsugineum (saltwater cress): EUTSA_v10010222mg
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Entry
EUTSA_v10010222mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10010222mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
EUTSA_v10010222mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
XPG_I_2
Chromo_shadow
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
18021523
NCBI-ProteinID:
XP_006404204
UniProt:
V4LT42
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MGVKYLWDVLEPCKKTYPLDHLQNKRVCVDLSCWMVELHKVNQSYCATKEKVYLRGFFHR
LRALIALNCSVILVSDGSIPGIKVPTYRRRLKSRFEVADDGVEPGKETSLKRNMGSEFSC
MIKEAKVIASTLGILCLDGVEEAEAQCALLNLESLCDACFSSDSDIFLFGAKTVYREICL
GEGGYVVCYEMENIKNKLGLGRNSLIALALLLGSDYSQGVRGIRQAKACEIVRSVGENVI
LEKVSSEGLSFVKKPRNSKKQVRPPVCSKKGTLPLVVINGSNSDPEELEQIKEVIDAFMN
PKCHPADSNTVSRALAEFSFQRTKLQEICHQFFEWPPEKTDEYILPKIAERNLRRFAILQ
SRSVEVDVNLPFHKLQIPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLETSIVPADLVER
ACPEKILEFKEKMEAKKKKPKPKQKQPKSKQKETSSPTKSSSLIELSLKLQHIVLNPTSV
EEAEQEKEQQNPKKHNYLSLIDSPAKENSNSDWSIMDRFGVTSSSCSLYPETEVIDLISP
CPEVRSRSMTRSYQEQKSHDQKLETVIELSDSETDDEEHCRKSRELRMFLENIKKDIIL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaagtatctttgggatgtattggagccttgcaagaagacttacccactcgat
catcttcaaaacaaaagggtatgcgtggatctctcttgttggatggtggaattgcataaa
gttaaccaatcgtattgcgccactaaagaaaaggtttatctccggggattctttcatcgc
ctccgtgccctaattgcccttaactgctccgtcattttagtctcagatggttcgattcct
ggaatcaaagtaccgacttacaggcgtcgattaaagtcaagattcgaggttgctgacgat
ggcgttgagcctggaaaagagacttcactcaaaagaaatatgggctcagagttctcctgc
atgataaaagaggcgaaagttattgcttcaacacttgggatactttgtttagatggggtt
gaggaagctgaggcacaatgtgctctgttaaacctggaatccttatgtgacgcctgcttt
agctctgattcagatattttcctttttggcgcaaagactgtgtacagagagatatgcctt
ggtgaaggaggttacgttgtttgctatgagatggaaaacatcaagaacaagcttgggctt
ggacggaactcattgatagctctggctcttctgcttggcagtgactactctcagggagtt
cgtggtattcgtcaggcaaaagcttgcgagatagttaggtctgttggagaaaatgttatc
cttgaaaaagtttcatcagaaggactttcatttgtgaagaagccgaggaattcaaagaag
caagttaggcctcctgtgtgcagtaagaaggggaccttacccttggtggttataaatgga
agtaatagtgatccagaagaactggaacagatcaaagaggtgattgatgcatttatgaat
cccaagtgccacccagcagactctaatacagtttccagggctctggctgaattctctttc
cagcgcaccaagcttcaggagatatgccatcagttctttgagtggccccctgagaaaaca
gatgaatatatacttcctaaaattgctgaaagaaatctgagaaggtttgctattctgcaa
tcaagatcagttgaggttgacgttaaccttcctttccacaagctgcagataccagagaag
tgcccggtgtctgaaatcataaagactcgcaaagtacagggacgagaatgttttgaagtc
tcatggaatgatctagaaggtttagagacgtccattgttcctgcagatcttgtagaaagg
gcttgtcctgagaagatcttagagttcaaggagaagatggaagcaaagaagaagaagccg
aagccgaaacaaaaacaacctaaatcaaaacagaaggaaacaagttcaccgaccaaatct
tcttctcttatcgaactcagcctcaaactccagcacattgttctcaatccaacctctgta
gaagaagcagagcaagagaaagaacagcaaaaccccaagaaacataattacttgtctcta
atcgattcgcctgctaaagaaaattccaatagtgattggtcgatcatggatagattcggt
gttacttcgagttcttgttcattgtatccggaaacagaagtcattgatctgataagccct
tgtcctgaagttcgttcacggagtatgacaagaagctatcaagagcagaagagccatgat
caaaaacttgagactgtgattgagctgagtgattcagagacagatgatgaagaacattgc
agaaaaagcagagagctcaggatgtttcttgaaaatattaagaaagatattatcctctga
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