KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10010392mg
Entry
EUTSA_v10010392mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10010392mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    EUTSA_v10010392mg
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF12 WDR54 VPS8_N
Other DBs
NCBI-GeneID: 18021442
NCBI-ProteinID: XP_006404167
UniProt: V4L5L6
LinkDB
Position
Unknown
AA seq 434 aa
MEISVIASSSIDGGIGSWDLKTGKEQLRFKTCASPAHGLTAVGEKFIAASQLRNASASSG
SIFFWSWNKPQVEVRSFPVESIKALAANTEGTYIVGGGTSGDIYLWEVATGKLLKKWHGH
YRSVTCLVFSGDDSLLVSGSQDGSVRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDI
VIDYGGCNAMIVSASEDRTCKVWSLSKGKLLRNIIFPSAINALSLDPGGFVFYAGSRDSK
IYIGAINATSDYGTQVLGSVSEESKAVTSLAYCADGNLLISGSEDGNICVWDPKSRRPVR
TFGHGKGPVNNIQVVRKTIVANSNKTQSSWKRHGSLLPPPLEKYERSGEESMDGIVIVDP
PPSADVSVYSSFLSADLINEQVKELQQQGSAATEIEMERLKLEYKKSLQMNDQWQKNYEN
LLEVVMEEQNGVSN
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggagatttctgttattgcttcgtcctctatcgatggcggaatcggaagctgggatctc
aaaaccgggaaagagcagcttcgattcaagacttgcgcctctcctgcgcacggtctcacc
gccgtcggagaaaagttcatcgccgcctctcagctccgtaacgcatccgcttcctctggc
tcgattttcttctggtcttggaacaagcctcaagttgaagtgaggagcttcccagtggag
tcaataaaagctcttgcagcaaacacagaaggaacttacatagttggtggtggaacctct
ggagatatatatctttgggaggttgcgactgggaagcttcttaagaagtggcacggtcat
taccgttcagtaacttgcttggtgttctctggagacgactctttgttggtttcaggatct
caagatggatctgttagagtctggtctctaataaggctatttgatgatttccagaggcag
caagggaacactctctatgaacacaattttaatgagcatacaatgtctgtaaccgacatt
gtcatagactatggaggctgcaatgctatgatagtttctgcttcagaagatcggacttgc
aaggtctggagcctgtcaaaggggaaattgttgagaaatatcatctttccttcagctatc
aatgcactttcattggaccctggtgggtttgtgttctatgctggtagcagagatagcaag
atttatatcggcgccattaatgccacaagtgactatgggacacaagttcttggttcagta
tccgaagaaagcaaagctgttacttccttagcatattgcgcagacggaaaccttttgatt
tctggatcagaagatggtaatatttgtgtttgggatcccaaatcacgtcgtcctgttcgt
acttttggccatggaaaaggccctgtgaacaatattcaagtagttagaaaaacgattgtt
gctaattccaacaaaacgcaatcttcctggaaaagacacgggtcgctcttacctccgcct
ttggaaaaatatgaaagatcaggagaagaaagtatggatggtattgttatcgttgatcca
ccgccatctgctgatgtttctgtttactcttctttcctcagtgctgatcttattaacgag
caagttaaagagcttcagcaacaaggctctgcagcaacggagatcgaaatggaaagactg
aaacttgaatacaaaaaatctttacagatgaatgatcagtggcagaagaattatgagaat
ttgcttgaggtcgtcatggaagaacaaaacggtgtttcaaattga

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