Eutrema salsugineum (saltwater cress): EUTSA_v10010392mg
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Entry
EUTSA_v10010392mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10010392mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
EUTSA_v10010392mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
18021442
NCBI-ProteinID:
XP_006404167
UniProt:
V4L5L6
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEISVIASSSIDGGIGSWDLKTGKEQLRFKTCASPAHGLTAVGEKFIAASQLRNASASSG
SIFFWSWNKPQVEVRSFPVESIKALAANTEGTYIVGGGTSGDIYLWEVATGKLLKKWHGH
YRSVTCLVFSGDDSLLVSGSQDGSVRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDI
VIDYGGCNAMIVSASEDRTCKVWSLSKGKLLRNIIFPSAINALSLDPGGFVFYAGSRDSK
IYIGAINATSDYGTQVLGSVSEESKAVTSLAYCADGNLLISGSEDGNICVWDPKSRRPVR
TFGHGKGPVNNIQVVRKTIVANSNKTQSSWKRHGSLLPPPLEKYERSGEESMDGIVIVDP
PPSADVSVYSSFLSADLINEQVKELQQQGSAATEIEMERLKLEYKKSLQMNDQWQKNYEN
LLEVVMEEQNGVSN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagatttctgttattgcttcgtcctctatcgatggcggaatcggaagctgggatctc
aaaaccgggaaagagcagcttcgattcaagacttgcgcctctcctgcgcacggtctcacc
gccgtcggagaaaagttcatcgccgcctctcagctccgtaacgcatccgcttcctctggc
tcgattttcttctggtcttggaacaagcctcaagttgaagtgaggagcttcccagtggag
tcaataaaagctcttgcagcaaacacagaaggaacttacatagttggtggtggaacctct
ggagatatatatctttgggaggttgcgactgggaagcttcttaagaagtggcacggtcat
taccgttcagtaacttgcttggtgttctctggagacgactctttgttggtttcaggatct
caagatggatctgttagagtctggtctctaataaggctatttgatgatttccagaggcag
caagggaacactctctatgaacacaattttaatgagcatacaatgtctgtaaccgacatt
gtcatagactatggaggctgcaatgctatgatagtttctgcttcagaagatcggacttgc
aaggtctggagcctgtcaaaggggaaattgttgagaaatatcatctttccttcagctatc
aatgcactttcattggaccctggtgggtttgtgttctatgctggtagcagagatagcaag
atttatatcggcgccattaatgccacaagtgactatgggacacaagttcttggttcagta
tccgaagaaagcaaagctgttacttccttagcatattgcgcagacggaaaccttttgatt
tctggatcagaagatggtaatatttgtgtttgggatcccaaatcacgtcgtcctgttcgt
acttttggccatggaaaaggccctgtgaacaatattcaagtagttagaaaaacgattgtt
gctaattccaacaaaacgcaatcttcctggaaaagacacgggtcgctcttacctccgcct
ttggaaaaatatgaaagatcaggagaagaaagtatggatggtattgttatcgttgatcca
ccgccatctgctgatgtttctgtttactcttctttcctcagtgctgatcttattaacgag
caagttaaagagcttcagcaacaaggctctgcagcaacggagatcgaaatggaaagactg
aaacttgaatacaaaaaatctttacagatgaatgatcagtggcagaagaattatgagaat
ttgcttgaggtcgtcatggaagaacaaaacggtgtttcaaattga
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