Eutrema salsugineum (saltwater cress): EUTSA_v10011188mg
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Entry
EUTSA_v10011188mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K24260
WD repeat-containing protein 11
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10011188mg
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
eus03037
]
EUTSA_v10011188mg
Membrane trafficking [BR:
eus04131
]
Endosome - Lysosome transport
Others
Others
EUTSA_v10011188mg
Cilium and associated proteins [BR:
eus03037
]
Other cilia and associated proteins
Other cilium assembly proteins
EUTSA_v10011188mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
TPR_GEMI5
ATR1_N
Motif
Other DBs
NCBI-GeneID:
18011264
NCBI-ProteinID:
XP_006392568
UniProt:
V4KFB4
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MAASKPSPTDSWDSTLPGPPSRNNFGSADLSPSGLFAFASGSSVSVVDSRSLQLVSTIPL
PPPPGALSPFVTSVRWIPLPLPRDLLSSEPSASHLLLAVADRHGRVALVDFHLRSVVVWL
NPSSDPKLGIQDLCWVQARHDSHVLASLSGSSFLSLYTTTSSDGVFWKYDAGTEILSCLR
RDPYDSRHFCVLGLKGFLLSIRVLGDTENDVVIQEMQIKTDFSELLRLEREAATNGNSSS
SSPASAAFPLYFARFAFSPHWKNILFVTFPRELLVFDLQYETALSTTPLPRGCAKFMDVL
PDPNKELLYCAHVDGRLSIWRRKEGEQVHVMCTVEELMPSIGMSIPSPSAMAVLLSQSDS
TMQTISKLHSDGISSVDFDSPFDFYDQNLLVSKSTFISLSDDGKIWKWVLSAEEVEDALK
NASDLDISTEGTKASPPGAIHKKDSLDLEDGLVVAPTNQIISHTSSSSLGNSDLSFKISL
AGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGTQNGTIDVVDVSTNAVAA
STSVHGGVVRGLRWLGNSRLVSFSYSQVNDKSRGYINKLVVTCLRSGLNKPFRDLQKPER
TPIRALRTSSSGRYLLILFRDAPVEVWAMTKHPVMLRSLALPFTVVEWTLPAVPRPGQGG
PPKQFLSSSEGGTASATASADSRLLIDISAEAVGSDGSNEETVESFAFALVNGALGVFEV
QGRRIRDFRPKWPSTSFVPSDGLVTAMAYRLPHVVMGDRSGNIRWWDVTTGQSSAFNSHR
DGIRRIKFSPVVAGDRSRGRVAVLFNDNTFSVFDLDSPDPVAQSLLQPQIPGTLVLELDW
LPLRTDKNDPLVLCIAGADSTFRLVEVIVNEKKVGFVPQSKSVKERFRPMPMYSPILLPV
PHALALRMILQLGVKPSWFNTCSTTLEKRPHLIRGMASSSKDLRSYMIHLPPLGDPVVPE
MLLKILEPYRKEGCLLDDERAKLYADVVKKGCAARFAFAAAVFGETSEAIFWLQLPQAIR
HLTNKLMKRSSQKTPSPALASGTDEASMPSKISSSGLSASEAKKIDSMCDGSLRLMAFER
EELWTRANERLPWHEKLEGEDCIQKQVHELISVGNLEAAVSLLLSSAPDSPYFYPNALRA
VALSSAVSKSLLDLALKVVAANMVRTDSSLSGTHLLCAVGRHQEACSQLQDSGRWTDAAT
LAATHLEGSDYARVLQRWADHVLHAEHNVWRYCIILDFNTV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcgaagccgtccccaaccgattcctgggattctactctgcctggtcctccc
agccgcaacaactttggatccgccgatctcagtccctccggtctcttcgccttcgcctct
ggctcctccgtctcagtcgtcgactctcgctctctccagctcgtctccactatccctctc
cctcctcctcccggcgccctctcccccttcgtcacttccgtccgctggatccctctccct
ctcccccgcgatcttctctcctccgagccctccgcctctcacctcctcctcgccgttgcc
gaccgccacggccgcgtcgccctcgttgacttccatcttcgctccgtcgtcgtctggctc
aacccctcctccgatcccaagcttggcatccaggacctttgctgggttcaggcccgccac
gactcccacgtcctcgcctccctttcggggtcttcctttctctctctctacaccaccacc
tcctccgacggagttttctggaagtacgatgccggcacggagatcctctcctgcctccgc
cgcgatccctatgattcccgccatttctgcgtccttggcctcaagggcttcctcttgtcg
atcagggtactcggagacaccgagaatgacgtcgtgattcaggagatgcagatcaagacg
gatttcagtgagctgctcaggctggaaagagaggcggccactaacggcaattcctcttct
tcttcgcctgcttcggcggcattccccttgtactttgccaggtttgccttctcgccacac
tggaagaatatactgtttgtgactttccccagggagctgttggtgtttgatctgcaatat
gagacggctctctcgaccaccccattacctcgtggatgcgccaagttcatggatgtcctg
ccggatcctaacaaggagttgctttactgtgctcatgtcgatggcaggctcagcatttgg
cgtcgcaaagaaggagaacaggtgcatgtcatgtgcaccgtggaagagcttatgccatct
attggaatgtccatcccttctccatcagctatggctgttctcctcagtcaatcggactcc
accatgcaaaccatttcaaaacttcactcagatggaatttcctctgtggattttgatagt
ccatttgacttttacgaccaaaaccttcttgtttctaagtcaacttttatttccctatct
gatgacggtaaaatatggaagtgggtcttgagtgctgaagaagttgaagatgccctgaaa
aatgcgtcagacttggacataagtacagaaggcactaaagcatctcctcctggagcaatc
cacaaaaaagattctttagatctggaggatggactagttgttgcacctacaaatcaaatc
ataagtcacacatcaagttcatcactgggaaattcagacctatcatttaagatcagcctg
gctgggcagcttcagcttctttcttccacagtctctacacttgccgtaccatctccatct
cttacggcaaccctagcgagagggggtaacattcctgcggcagctgttcctttggttgct
ttgggaactcagaacggaacaatcgatgttgttgatgtatcgacaaatgctgttgctgca
agcacttcggttcatggtggtgtagttaggggacttcggtggcttggaaattcaagatta
gtttcattttcttacagtcaggtgaatgacaaaagcagaggctacataaataagcttgtt
gttacatgccttaggagtggattaaataaaccatttcgggatttacaaaagccagagcgt
actcccataagagctcttagaacttcttcttccggaaggtatcttttaattctgttccgt
gatgctcctgtagaagtttgggcaatgaccaagcatccagtaatgcttagatcattagct
cttccttttacggtagtagaatggacgcttccagcagttccacgcccaggtcaaggcggt
ccgcccaaacaatttctctcatcatccgaaggaggtactgcttcagcaacggcgtcagca
gactctaggttgctaattgacatatccgcagaggcagtggggtcggatgggtcaaatgaa
gaaactgtagagagttttgcatttgcactagtaaatggtgcccttggagtatttgaagtc
caaggacgtaggattcgagatttcagaccaaaatggccatctacttcatttgttccatca
gatggattggttacagccatggcatatcgcttgcctcacgtggtcatgggagatagatca
ggaaacataagatggtgggatgtaacaactggacagtcatctgcattcaatagccacaga
gatggaatacgtagaatcaaattctcacctgttgttgctggagatcgcagccgagggcgt
gtagctgtgctatttaatgacaatacattttctgtttttgatcttgattcacccgatccg
gtcgcccagtcgcttctgcagccgcagattcctggcacccttgtactggaacttgattgg
ttgcctttgagaactgataaaaatgatccacttgttctatgcattgctggagctgacagc
acctttcggctcgttgaggttattgtaaatgaaaagaaggttggctttgtgccccagtct
aaatctgtaaaggagagattccgtcctatgcctatgtactcccctatcctacttcctgta
ccacatgcgctggcactgcggatgattttacagttgggagtgaaaccatcttggtttaat
acttgtagcaccactttggagaaaaggcctcatttgatccgtggaatggcttcatcctct
aaggatcttcggagctacatgattcacttaccacctttaggagaccctgtagtgccagag
atgctgctgaagatactagagccatatcggaaagaaggttgcttgcttgatgatgaaaga
gcaaaactgtatgctgatgtggtcaagaaaggttgtgctgcaagatttgcttttgcggct
gcagtttttggtgaaacctcagaagctattttctggttgcaactgcctcaagccattcgc
catctgacgaacaagctgatgaaaaggtcttcgcagaaaaccccttcccctgctttggcc
tcaggtaccgatgaagcatctatgccgagtaaaatatcatctagtggtttatcagcatct
gaagccaagaagatagactctatgtgtgatggttcacttagattaatggcttttgagcga
gaagaattatggacacgtgccaatgaacgtcttccttggcatgaaaaattggagggggaa
gattgcattcagaaacaagtacatgagctaatatcagttgggaatttggaagctgctgtt
agtttgctgctttcttctgctccagattctccatacttctatccaaatgctctccgagct
gttgcactctcttcagctgtgtccaaatctcttctcgaccttgcactaaaggttgttgca
gccaacatggtaaggacggacagttcgctctctggtactcatcttctatgcgcggttggg
agacaccaagaagcttgttcacaactgcaagattctggacgatggactgatgctgctacc
ttggctgccacacatttagaaggatcggattatgctagggtattgcagaggtgggctgat
catgttctccacgcggagcacaatgtctggaggtactgtatcatactcgacttcaatact
gtttaa
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