Eutrema salsugineum (saltwater cress): EUTSA_v10011191mg Help Entry EUTSA_v10011191mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03018   RNA degradation Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     EUTSA_v10011191mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:eus03019]     EUTSA_v10011191mg    03012 Translation factors [BR:eus03012]     EUTSA_v10011191mg Enzymes [BR:eus01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      EUTSA_v10011191mg Messenger RNA biogenesis [BR:eus03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      EUTSA_v10011191mg Translation factors [BR:eus03012]  Eukaryotic type   Initiation factors    Initiation associated factors     EUTSA_v10011191mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind HA2_C Helicase_C DEAD HA2_N dsrm AAA_22 T2SSE AAA_19 nSTAND3 ATPase AAA_16 NPHP3_N PhoH Myosin_head Dicer_dimer Motif Other DBs NCBI-GeneID:  18011146 NCBI-ProteinID:  XP_006393372 UniProt:  V4KTG8 LinkDB All DBs Position Unknown AA seq 1199 aa AA seqDB search MPYYSAIFRGHIRPNAVVGAASMFIQHNSVQLHRSTKLVLKTSSLVRSLHCRRSGGLRVL SVRAGRRDASSSSSSSSSSSSTLGLEWRTSNLPYFQKQSSGYGRIAYNDYESSDDSDRDI GSSQSQQMAGSTLDNIDQWRFKLTMLLRNREDQEVVSRERKDRRDFEHISTMATRMGLHS RQYSKIIVISKSPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHLHAFLDQKKMMIPEMPR PNSSESLATDYGNYEKPETVMQNSLARERVLRPRSLQLRSKQQQWVDSPEGQKMVEFRKT LPAYKEKDALLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT HVVVDEIHERGMNEDFLLIVLKELLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGF TYPVRAHFLEDLLETTGYRLTAYNQIDDYGEEKTWKMQKQAQFKKRKSQISSAVEDALEA ADFKGYNFRTRDSMSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQL EAHPLLGDLNKVLLLACHGSMASSEQRLIFDRPPEGVRKIVLATNMAETSITINDVVFVV DCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYDAFADYQ QPELLRTPLQSLCLQIKSLRLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDNENLT ALGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAESAKSK FSGRDCSDHLTLIRAYNGWKEAERTQSGYEYCWKNFLSAQTLKAMDSMRKQFFFLLKEAS LIDNIEGCSKLSYDDHLIRAIICAGLFPGICSVVNKEKSITLKTMEDGQVLLYSSSVNGN VPRIPFPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGDKVSSGGFDGHLKMLGGYLEFFM KPTIAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSEDQCEGRFVFGRKAL SPTTTKKLKVVGAQLQNSGGENEKNQLQTLLARAGHGTPVYKTRQLKNNQFRAMVTFNGL DFMGKPCGSKKNAEKDAAHEALLWLQGESKSSLNDLNHMSTLLKKEKRKKTERAPARWG NT seq 3600 nt NT seq  +upstreamnt  +downstreamnt atgccttattactcagcaattttccgaggacatatcagacctaacgccgtcgtcggtgct gcctccatgtttatccaacataattccgtccagcttcatcgcagcactaaattagtgtta aaaacatcttctttagttaggtctcttcattgtcggaggtcaggaggattaagggtcttg tccgtgagagcaggtcgtcgcgatgcttcttcttcttcctcttcttcttcctcttcttct tcgactcttgggttagagtggagaacgtcgaatttgccttactttcagaagcaaagctct ggctatggacgaattgcttacaacgactacgaatcaagcgatgactcggaccgtgatata ggttcttctcagtctcagcaaatggcgggttcgactcttgataacattgatcaatggagg ttcaagcttactatgcttctacggaacagagaagaccaagaagttgtgtcaagggagaga aaagatcggcgtgattttgagcatatttcaacgatggcaacaagaatgggattacacagt cgtcagtattcgaagatcattgtcattagcaaatctcctttgccgaattatagacccgat cttgatgataagcgcccacaaagagaggtggttttgccttttggcctacaaagcgaagtg gatgcccatctacatgctttcctcgaccagaagaaaatgatgattccagagatgcctagg ccaaatagtagtgaaagtttagcaactgattatggaaactatgagaaaccagagaccgtc atgcagaatagtcttgccagggaaagagtactccgtcccagaagtttgcaactgaggagc aagcaacagcaatgggtggattctccagaaggccagaaaatggttgagtttcgcaaaaca cttcctgcatacaaagagaaagatgcgttattgaaagccatttcggaaaatcaggtcatt gtggtttctggagaaacaggttgtggtaagacaacgcagcttccacagtacatcttagaa tccgagatcgaggctgcccgtggagctacgtgcagtatcatatgtacacagcctagaaga atatctgctatttctgtttctgaacgagttgctgcagaacgtggagagcaaataggagaa tccgttggctacaaagttcggcttgaaggaatgagggggagagacacacgtcttcttttc tgtacaactggtgttttacttagacggttacttgtggatcgtagcctgaaaggtgtgacg catgtcgtagttgatgaaattcatgaacgtgggatgaatgaagattttctgcttattgtc ttgaaagaactccttcctcgtcgacctgacctaaagttgattctaatgagtgctactttg aacgctgagctcttttcttcttattttggtggtgctccagccatgcatatcccaggtttt acataccctgtccgagcccatttcttggaggatcttctcgagactactgggtacaggctc acagcatataatcaaattgacgattatggtgaagaaaagacatggaagatgcaaaaacaa gctcaattcaagaaaagaaaatcccagatatcctctgctgttgaggatgctcttgaagct gcagacttcaaaggatacaactttcgtaccagagattccatgtcatgctggagtcctgat tcaataggctttaacctcattgagaatgtgctttgtcacatcgtcaaaggagaaagacct ggtgctgttttggtattcatgaccggttgggatgatataaactccttgaagaatcagctc gaagctcatcctcttctaggagacctcaacaaagttttgttgcttgcctgtcatggatcc atggccagctctgagcagaggctgatttttgatagacctccagaaggagttagaaaaata gtgctggccaccaatatggctgagacaagtattaccatcaatgatgttgtatttgtggtt gattgtggtaaagcaaaagaaacgtcatacgatgcgcttaacaataccccttgtctgctt ccatcgtggatttcgaaggcagctgctcgccaaagaagaggaagagctggccgtgttatg cctggagaatgttatcacctttatcctagatgtgtctatgatgcttttgctgactaccag cagccagaactcctaaggactccgttgcagtctctatgtctacaaatcaaaagcttaaga cttggaagcatttcagagttcctttcccgagcgttgcaacctcctgaagctttatcagtc caaaatgctgttgagtatctgaagatcattggggctcttgatgacaacgaaaatttaaca gctttagggaaaaacttgtctatgcttcctgtggagcctaaacttggaaaaatgcttatt ttaggggctatcttcaactgtctagatccagtaatgacagttgttgctggtcttagtgtc agagacccattccttatgccatttgacaaaaaggatctagcagaatcagcaaagtccaag ttctctggccgtgattgcagtgatcatttgacattgattcgagcgtacaatggttggaaa gaagctgaaagaacacagtctggttacgagtattgctggaagaactttctctctgcgcaa actcttaaggccatggactctatgcgaaaacaattcttcttcctcctcaaggaggcttct ctgattgataacattgaaggttgtagtaagctgagttatgatgatcatcttatccgcgca atcatctgtgctggtctgttccctggaatttgctctgtcgttaataaggaaaagtcaatt acgctaaagacaatggaggatgggcaagtacttctgtactcgagttctgtgaatggaaat gtaccaaggattcctttcccttggctagtcttcaacgaaaaaatcaaagtcaattctgtg tttcttcgagattccactgctgtatctgactctgtgcttcttctgtttggggataaagta tcctccggtggatttgatggtcatctcaaaatgctgggaggatatctagagtttttcatg aaacccactatagcatatacatacctttcgttaaaaagagagctcgacgaacttattcag aataagcttgtgaatccaaaacttgatattcaactatacgacaaactgatgactgccatt agattacttgtgtctgaggaccagtgtgagggcagattcgtctttggccggaaagctcta agccctacaacgacaaagaagttaaaagtagtaggagctcagctgcagaacagtggcggg gaaaacgagaagaaccaacttcagacattgcttgcccgagcaggacacggaacacctgtt tacaagacaagacagcttaagaacaaccagttccgcgctatggttactttcaatggattg gatttcatgggaaagccatgtggtagtaagaaaaatgcagagaaggatgcagctcatgag gctttgttgtggttacaaggtgagtccaagtcgagcctgaatgatcttaaccacatgtct acgctcttaaagaaggagaaaagaaagaaaaccgaaagggcaccagctcgatggggttaa

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