Eutrema salsugineum (saltwater cress): EUTSA_v10011196mg
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Entry
EUTSA_v10011196mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10011196mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10011196mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10011196mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EUTSA_v10011196mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
EUTSA_v10011196mg
microRNA pathway
RISC loading complex
EUTSA_v10011196mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18011468
NCBI-ProteinID:
XP_006393416
UniProt:
V4KL89
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MVRKKRNDGQSEGGEGSGSREAGPVSGGGRGGSQRGGYQQGGGGGGGGGQYQGGRGYNPQ
TQQGGRGGGRGYGGPPQEYGGPQEYQGRGRGGPPQEYGGPQEYQGRGRGGPQEYQGRGRG
GPPHQGGRGGYGGGRGGGSSGGQPPRQSHPELHQATSPAYQAVSSQPASSEASPIQMPEP
PVPVQQFEQLTIEQGAPSQAIQPIPSSSKAYKFPMRPGKGQVGKRCIVKANHFFAELPDK
DLHQYDVTITPEVTSRGVNRAVMKQLVDLYRVSHLGKRLPAYDGRKSLYTAGPLPFVSKE
FRITLLDEEEGPGGQRREREFKVVIKLAARADLHHLGLFLEGKQADAPQEALQVLDIVLR
ELPTSKYTPVGRSFYSPNIGTKQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEA
LPVTEFVCQLLNRDIRSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTAVATR
ELTFPVDERNTQKSVVEYFYETYGFRIQHTQLPCLQVGNSNRPNYLPMEVCKIVEGQRYS
KRLNERQITALLKVTCQRPLEREKDILRTVQLNAYDKDPYAKEFGIKISATLASVEARIL
PPPWLKYHESGREGTCLPQVGQWNMMNKKMINGGTVSNWICINFSRQVPENLARTFCQEL
AQMCHVSGMAFNPEPVLPPVSARPEQVEKVLKTRYHDATAKLAKGKEIDLLIVILPDNNG
SLYGDLKRICETELGIVSQCCLTKHVFKMSKQYMANVALKINVKVGGRNTVLVDALSRRI
PLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDL
FKEWKDPQKGVVTGGMIKELLIAFRKSTGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRK
ACASLEAGYQPPVTFVVVQKRHHTRLFAHNHQDRNSVDRSGNILPGTVVDSKICHPTEFD
FYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAH
LAAFRARFYMEPETSDSGSMASGSMARGGGMGGRNTRGPNVNAAVRPLPPLKDNVKRVMF
YC
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaaatgatggtcaatctgaaggaggcgaaggatctggttcccgt
gaagctggtccagtttctggtggtggacgtggtggctctcagcgtggtggttaccagcaa
ggaggaggaggaggaggaggaggaggacagtaccaaggtggaaggggttataatcctcag
actcaacagggaggtcgtggtggtggtcgtggatatggaggacctccacaagagtatggt
ggaccacaagagtaccaaggaagaggaaggggtggacctccacaagagtacggtggacca
caagagtaccaaggaagaggaaggggtggaccacaagagtaccaaggaagaggaagagga
ggacctcctcatcaaggaggtcgaggagggtatggcggtggccgcggaggtggatcctct
ggtggacagccgccgagacaatcacaccccgagctgcaccaagctacctcacctgcttat
caagcggtgtcttctcaacctgcatcgtctgaggcaagtccgatccagatgccggaacct
cctgttccggttcagcaatttgaacagctcactattgaacaaggagctcccagtcaggca
atccagcctattccctcttctagcaaagcttacaagtttccgatgaggcccggtaaagga
caggtcggtaagcgctgcattgtaaaggctaaccacttctttgctgagttgcctgacaag
gatttgcaccagtatgatgttaccattactccagaagttacatcaaggggtgttaatcgt
gctgtgatgaaacagttagttgatttgtatagagtatcacaccttggaaagcgtcttcca
gcgtatgatggccggaaaagtctgtacactgctggaccacttccgtttgtctccaaggag
ttcagaatcacacttcttgacgaggaagaagggcctgggggacaaagacgagaaagagaa
ttcaaagttgtgatcaagctagctgcacgagctgatctgcatcatctaggattgttttta
gaggggaaacaagctgatgccccgcaagaagctcttcaggttctcgacattgttcttcgt
gagctgcctacctctaagtatactcctgtgggccggtcattttattctcctaatatagga
acaaaacaaccattgggggatggcttggagagctggcgtggattctaccaaagcattcgt
cctacacagatgggcttatcactcaacattgatatgtcatctacagcattcatagaggca
cttcctgtgactgaatttgtttgccagttgctgaatcgggatattagatcccgcccttta
tctgatgctgatcgtgttaagataaaaaaggctcttagaggtgtcaaagttgaagtgacc
catcgaggaaatatgcgccgaaagtaccgcatttctggcttgactgccgtggccactcga
gaattaacatttcctgtggatgaaagaaacacccagaaatctgtagtagaatacttctac
gaaacatatggttttcgcattcagcacacgcagctaccatgcttgcaagttgggaattct
aacaggccaaattacctcccgatggaggtctgcaaaattgttgagggtcagagatactca
aaaaggttgaacgagagacagatcactgctttgctgaaggtgacttgtcagcgccccctt
gaacgagaaaaagatatcttacggacggtacaactcaatgcttatgataaagatccctat
gctaaggagtttggtatcaagataagtgcgacccttgcttctgttgaggctcgaattctg
cctcctccatggctcaagtatcatgaatctggaagggaagggacttgtctgccacaagtt
ggtcagtggaatatgatgaacaagaaaatgataaatggcggaacagtcagtaactggatc
tgcatcaacttctctaggcaagtgccggaaaatctagcacgtactttctgtcaggaactt
gctcaaatgtgccacgtatctggcatggcgtttaatccagaaccagtcctcccaccagtc
agtgctcgccctgagcaagtggaaaaagtcttgaagactcggtatcatgatgccacggcc
aagctcgctaagggaaaagagattgatcttcttattgtcattctgccagacaataatgga
tcattatatggtgatctgaagcgcatctgtgagaccgaactaggcatcgtgtctcagtgc
tgcctgactaagcatgtttttaagatgagcaaacagtatatggccaacgtggctctgaag
attaatgtcaaagttggaggaaggaatacagtgcttgttgatgccttatcaaggcgaatc
cctctagtcagtgatcgccccaccattatatttggcgctgatgtaacccatcctcatcca
ggagaggattcgagcccgtccattgctgctgttgtcgcgtcccaggactggcctgaaatc
accaaatatgctggattggtttgtgctcaagcgcatagacaggagctcattcaggatctg
ttcaaagaatggaaggatcctcagaaaggggtggtgactggtggcatgataaaggagttg
ctgatagccttccgtaaatcaactgggcataagccgttgaggatcattttctacagggat
ggagttagtgaaggacagttttatcaggttttgctctatgagcttgacgccatccgcaag
gcatgtgcttcgctggaagcaggttatcagcctccagtcacgtttgtggtggtgcagaag
cgccatcacacgaggctgtttgctcacaaccaccaagatcgtaattctgtggatagaagt
ggaaacattttacctggcactgttgtggactccaaaatctgtcatcctacagagttcgac
ttttatctctgtagccatgctggtattcagggcacttctcgacctgctcactaccacgtt
ctttgggatgagaacaacttcagtgccgatggactccaatctctgaccaataacctatgt
tacacgtatgcaagatgcacccgttctgtatcaattgtgccacctgcgtactatgcacat
ctagcagcgttcagggctcggttctacatggagccagagacttcagacagtggttcgatg
gctagcgggagcatggcacgtggaggtggtatgggcggtagaaacacacgtgggcctaac
gtgaacgctgcagtgagaccactcccaccactgaaagataatgtgaagcgtgtcatgttc
tattgctga
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integrated database retrieval system
