Eutrema salsugineum (saltwater cress): EUTSA_v10011237mg
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Entry
EUTSA_v10011237mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10011237mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
EUTSA_v10011237mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_BBS7
StcE_b-sandwich
Motif
Other DBs
NCBI-GeneID:
18011301
NCBI-ProteinID:
XP_006393248
UniProt:
V4KH95
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MSENTEVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHKA
SVNCTHWLPSSKFAFKAKHLDQHYLLSGDTDGIIILWELSTANNNWRHVLQLPRSHKKGV
TCITAYMVSETDAMFASASSDGVVNVWDVSFPSQSSEECKVLCLDSICVDSKAIVTLSLA
ELPNNPGRFVLALGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPLHSTEETT
NSIMLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFISGTFTYQISVESVLIG
HEDWVYSVEWQPPVIDSIDGQLINHQPLSILSASMDKTMMIWRPEKNTGVWVNVVCVGEL
SHCALGFYGGHWSPDGVSILAHGYGGSFHLWRNVSSCKESENWQMQKVPSGHFAAVTDIT
WARTGEYLLSVSHDQTTRVFSSWKSNEGNEAEDEHWHELARPQVHGHDINCVAMVQGKGN
HRFVSGAEEKVVRVFEAPLSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKP
IYLNSSSQPLERNGGGEGLDTFETVPEAAPAELKEPPIEDQLAFHTLWPESHKLYGHGNE
LFSLCCDHNGSLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLL
LSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKI
WSIEKDARVKQVLALPQFGSSVTAVAWTGLDHKEKSGCIAIGMESGLIELWNIKIRETEE
GTTATAALALRLEPFMCHVSAVNRLAWRPTEKSEINQSLLRLTSCGDDNCVRVFDFKF
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaacaccgaagtcgaagcgaagagagtgttcataggagcaggatgcaacaga
gtggtgaataacgtgtcttggggagcttctggtcttgtctccttcggtgcccaaaacgcc
gttgctgttttctgccctaagactgcccagattcttactacgcttccaggtcacaaagct
tctgtgaattgcactcattggttacccagtagcaagtttgctttcaaagccaagcatttg
gaccaacattatctgctctcaggtgataccgatggtatcatcatcctttgggaactttcg
actgccaataacaattggagacatgtactacaactaccacggtctcacaagaaaggtgta
acttgcatcactgcgtatatggtttctgaaaccgatgcaatgtttgcttctgcttcttca
gatggagttgtgaatgtctgggatgtttcttttccatctcagtctagtgaggaatgtaaa
gtcttgtgtctggattccatctgtgtggactccaaagcaattgtaacgctttcattagcg
gaattgcctaacaatcctggtagatttgtcctcgctttgggtggattggacaacaaaatc
aaactttactgtggagaaagaacaggaaagttcacttctgtttgtgagctcaaaggccac
acggactggattcggagtttggacttctcattaccgttacactcaacagaagaaaccacc
aatagtattatgcttgtgagttcttcccaggacaaagttattcggatctggaaactcgtg
ttagtcggtgatgttggctcatggcaaagagaaattactcttgcttcttacattgaaggc
ccggttttcatctcagggacgttcacataccagatttcagtcgaatctgttctcattgga
catgaagattgggtttattcagtggaatggcaacctccagtcattgattcaattgacggg
cagttaattaaccaccaaccgctgagcattttatcggcttcaatggacaaaacgatgatg
atttggcgacctgagaagaatacgggtgtgtgggtgaatgttgtgtgtgtgggagagctt
agtcattgtgctcttggtttctacggtggccattggagcccagatggtgtgtcgattctt
gctcatggatacggtggatcttttcatctctggagaaatgtaagcagctgcaaagagtct
gagaactggcagatgcagaaagtcccgtcaggtcattttgctgctgtgactgatatcacg
tgggctagaaccggcgagtacttactatccgtgagccacgatcagacgacccgtgtgttt
tcatcatggaaaagtaatgagggaaatgaagcagaggatgagcattggcatgaactggct
cgtccacaggttcatggtcatgacattaattgtgtggctatggttcaaggtaaaggtaat
caccgttttgtaagtggagcagaggagaaagttgtgagagtttttgaggctcctctatct
ttcttgaagacactgaaccacacttgtgccggaggagaaggaagcttccctgaggattta
caagcagatgtgcaggtccttggagctaatatgtctgctcttggtttatcacagaaacct
atctacttaaactcttctagtcaaccgcttgagagaaatggcggaggagaaggtttggat
acatttgaaacggttccagaggctgctccagcggagttgaaggagcctccaatcgaagat
cagcttgcgtttcatactttatggccggaatctcataaactctacggtcatggtaatgag
cttttttctctctgctgtgaccacaacggaagccttgttgcttcatcgtgtaaggctcaa
tccgcatccatggcggaaatatggctatgggaggttggaacatggaaagctgttggtcgt
ttgcaatctcacagcttgacagtgacacacttggagttctcttatgacgacactctgctc
ttgtctgtctccagagatcgtcacttctcagttttctcgatccaaagaacagacaatggc
gaggttagtcacaaactcatggcaaaggttgaagcacacaagaggatcatatgggcatgt
tcatggaacccatttggccaccaatttgcaacttcatcaagagacaagaccgtgaaaatc
tggtccatcgagaaagacgctcgtgtcaaacaggttcttgccttgcctcagtttgggagc
agtgtcacagctgtagcttggacgggactagaccacaaggagaaaagtgggtgcatagcg
attgggatggaaagcggactgatagagctgtggaacataaagattagagaaacagaggaa
ggtacaacggcaacagcagctcttgctcttaggctcgaaccatttatgtgtcatgtctca
gccgtgaaccgattagcatggagaccaaccgaaaagtctgagattaaccagagcttgcta
aggttaacttcttgtggtgatgataattgtgtgagagtttttgacttcaagttttga
DBGET
integrated database retrieval system