KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10011237mg
Entry
EUTSA_v10011237mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11374  elongator complex protein 2
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eus03016]
    EUTSA_v10011237mg
Transfer RNA biogenesis [BR:eus03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    EUTSA_v10011237mg
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_BBS7 StcE_b-sandwich
Other DBs
NCBI-GeneID: 18011301
NCBI-ProteinID: XP_006393248
UniProt: V4KH95
LinkDB
Position
Unknown
AA seq 838 aa
MSENTEVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHKA
SVNCTHWLPSSKFAFKAKHLDQHYLLSGDTDGIIILWELSTANNNWRHVLQLPRSHKKGV
TCITAYMVSETDAMFASASSDGVVNVWDVSFPSQSSEECKVLCLDSICVDSKAIVTLSLA
ELPNNPGRFVLALGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPLHSTEETT
NSIMLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFISGTFTYQISVESVLIG
HEDWVYSVEWQPPVIDSIDGQLINHQPLSILSASMDKTMMIWRPEKNTGVWVNVVCVGEL
SHCALGFYGGHWSPDGVSILAHGYGGSFHLWRNVSSCKESENWQMQKVPSGHFAAVTDIT
WARTGEYLLSVSHDQTTRVFSSWKSNEGNEAEDEHWHELARPQVHGHDINCVAMVQGKGN
HRFVSGAEEKVVRVFEAPLSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKP
IYLNSSSQPLERNGGGEGLDTFETVPEAAPAELKEPPIEDQLAFHTLWPESHKLYGHGNE
LFSLCCDHNGSLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLL
LSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKI
WSIEKDARVKQVLALPQFGSSVTAVAWTGLDHKEKSGCIAIGMESGLIELWNIKIRETEE
GTTATAALALRLEPFMCHVSAVNRLAWRPTEKSEINQSLLRLTSCGDDNCVRVFDFKF
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgtcggaaaacaccgaagtcgaagcgaagagagtgttcataggagcaggatgcaacaga
gtggtgaataacgtgtcttggggagcttctggtcttgtctccttcggtgcccaaaacgcc
gttgctgttttctgccctaagactgcccagattcttactacgcttccaggtcacaaagct
tctgtgaattgcactcattggttacccagtagcaagtttgctttcaaagccaagcatttg
gaccaacattatctgctctcaggtgataccgatggtatcatcatcctttgggaactttcg
actgccaataacaattggagacatgtactacaactaccacggtctcacaagaaaggtgta
acttgcatcactgcgtatatggtttctgaaaccgatgcaatgtttgcttctgcttcttca
gatggagttgtgaatgtctgggatgtttcttttccatctcagtctagtgaggaatgtaaa
gtcttgtgtctggattccatctgtgtggactccaaagcaattgtaacgctttcattagcg
gaattgcctaacaatcctggtagatttgtcctcgctttgggtggattggacaacaaaatc
aaactttactgtggagaaagaacaggaaagttcacttctgtttgtgagctcaaaggccac
acggactggattcggagtttggacttctcattaccgttacactcaacagaagaaaccacc
aatagtattatgcttgtgagttcttcccaggacaaagttattcggatctggaaactcgtg
ttagtcggtgatgttggctcatggcaaagagaaattactcttgcttcttacattgaaggc
ccggttttcatctcagggacgttcacataccagatttcagtcgaatctgttctcattgga
catgaagattgggtttattcagtggaatggcaacctccagtcattgattcaattgacggg
cagttaattaaccaccaaccgctgagcattttatcggcttcaatggacaaaacgatgatg
atttggcgacctgagaagaatacgggtgtgtgggtgaatgttgtgtgtgtgggagagctt
agtcattgtgctcttggtttctacggtggccattggagcccagatggtgtgtcgattctt
gctcatggatacggtggatcttttcatctctggagaaatgtaagcagctgcaaagagtct
gagaactggcagatgcagaaagtcccgtcaggtcattttgctgctgtgactgatatcacg
tgggctagaaccggcgagtacttactatccgtgagccacgatcagacgacccgtgtgttt
tcatcatggaaaagtaatgagggaaatgaagcagaggatgagcattggcatgaactggct
cgtccacaggttcatggtcatgacattaattgtgtggctatggttcaaggtaaaggtaat
caccgttttgtaagtggagcagaggagaaagttgtgagagtttttgaggctcctctatct
ttcttgaagacactgaaccacacttgtgccggaggagaaggaagcttccctgaggattta
caagcagatgtgcaggtccttggagctaatatgtctgctcttggtttatcacagaaacct
atctacttaaactcttctagtcaaccgcttgagagaaatggcggaggagaaggtttggat
acatttgaaacggttccagaggctgctccagcggagttgaaggagcctccaatcgaagat
cagcttgcgtttcatactttatggccggaatctcataaactctacggtcatggtaatgag
cttttttctctctgctgtgaccacaacggaagccttgttgcttcatcgtgtaaggctcaa
tccgcatccatggcggaaatatggctatgggaggttggaacatggaaagctgttggtcgt
ttgcaatctcacagcttgacagtgacacacttggagttctcttatgacgacactctgctc
ttgtctgtctccagagatcgtcacttctcagttttctcgatccaaagaacagacaatggc
gaggttagtcacaaactcatggcaaaggttgaagcacacaagaggatcatatgggcatgt
tcatggaacccatttggccaccaatttgcaacttcatcaagagacaagaccgtgaaaatc
tggtccatcgagaaagacgctcgtgtcaaacaggttcttgccttgcctcagtttgggagc
agtgtcacagctgtagcttggacgggactagaccacaaggagaaaagtgggtgcatagcg
attgggatggaaagcggactgatagagctgtggaacataaagattagagaaacagaggaa
ggtacaacggcaacagcagctcttgctcttaggctcgaaccatttatgtgtcatgtctca
gccgtgaaccgattagcatggagaccaaccgaaaagtctgagattaaccagagcttgcta
aggttaacttcttgtggtgatgataattgtgtgagagtttttgacttcaagttttga

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