Eutrema salsugineum (saltwater cress): EUTSA_v100113511m
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Entry
EUTSA_v100113511m CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EUTSA_v100113511m
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v100113511m
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
EUTSA_v100113511m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_C
DUF5514
Motif
Other DBs
NCBI-GeneID:
18010468
NCBI-ProteinID:
XP_006393488
UniProt:
V4KHU7
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
LLGFTEASNILRHYYMKDVNIVVPDPSKEKSVIAVSAIAREMKQTNKVAIVRCVWRNGQG
NVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFSRFPASWKPDEQQQAVADNL
VKMLDLAPSAKEEVLKPELTPNPVLQRFYEYIELKARSMDAALPPVDEAFKRIMEQDPEL
SSNNKSIMDSFRKSLEVMENPKLKKTSKRYLRDKPSGSDDEDNRMVTYNANENKVDTIGD
ATPVQDFEAMISRRDNHDWIDKAISQMKNRIVKLVEDSTHEGDKALECLLALRKGCVLEQ
VSSAFFLSRLLHFTLESIVNSLSLDSYICVLRSQSNSMSS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
cttctgggatttactgaggcgtcaaacatactgcgacattattacatgaaagacgtgaac
atagttgttccggatccgagcaaagaaaaatctgttattgccgtctctgcaattgcaaga
gaaatgaagcaaacaaacaaggtggcaattgtacgttgtgtctggagaaatggacaaggg
aatgtggttgttggggtcctgactccaaatgtgtctgaacgagatgacacccctgattct
ttttacttcaacgtgctacctttcgccgaagatgtccgcgagtttccatttccttctttc
agcagatttcctgcatcgtggaagccagatgagcaacaacaagcagtggcagacaatttg
gttaagatgcttgaccttgcaccttctgctaaagaggaagtactaaagcctgaacttact
cctaacccggttttgcagcgcttttatgaatacattgagttgaaagcaagatccatggat
gctgctttacctccagtagatgaagctttcaagaggattatggagcaggatccagaactc
tcttccaacaataaatccataatggattcatttcgtaaaagtttggaagtcatggagaac
ccaaagttgaaaaaaacttctaagagatatttacgagataagccatcaggttcagatgat
gaagacaatcgcatggttacttataatgccaatgagaacaaagtcgacacaatcggagat
gcaaccccagttcaagattttgaagccatgatatctcgtagagataaccatgattggatc
gataaagcaatcagtcaaatgaaaaaccgaatagtgaagctcgtagaagatagtacccat
gaaggtgataaagcattggaatgtttgcttgctctacgcaaaggctgcgtcttggaacag
gtctcatctgctttttttctatctcgacttttgcattttactctcgaaagcattgttaac
tccttgtcattggattcttacatatgtgtgctcaggagccaaagcaattcaatgagttct
tga
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