Eutrema salsugineum (saltwater cress): EUTSA_v10011448mg
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Entry
EUTSA_v10011448mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
eus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10011448mg
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10011448mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10011448mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10011448mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EUTSA_v10011448mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EUTSA_v10011448mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
F-actin_cap_A
Motif
Other DBs
NCBI-GeneID:
18010618
NCBI-ProteinID:
XP_006393617
UniProt:
V4KU38
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MEWMLLFVPDDRKSDSKIEVQTQNIENHKYSKESHQLPLFKLTNKQGRSHTFVFGNYPDM
NAFRDIITKALAKCEEDPKKSTEQLCFADLELRVKLLRENSELQRLHKQFVESKTNKVTF
NFTPEIIFQFFAEKPAVRQAFINYVPSKITEKDFWTKYFRAEYLYSTKNTAVAAAEATED
ELLAVFLKPDEISAREARRKIRRVDPTLDMVADHAGDDTLSMDQCMDVAEPHKDLFKRRS
LAQDIDRHGAAVLEGRSIDVESEDSRIVAEALTRVKHASKATKDAEQERLEKMSRALMED
LQAPKNFAFDPRDYFESQQGNVLNEPIGAGELKRNVHEAYGLLKESISELRFKNHGLFAL
LPKLRNVIGKNPREKFLDRLPKSIKDEILHQWTSIQELLRHFCSSFPITTTYLYTKVLRL
KDAMSNIYSQLEVMKESVQSDLRHEVSLLVRPMQQALDAAFQQLHDMSKHVYKVHLKN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaatggatgctgctcttcgtacctgatgatcgaaaatcagattcaaagattgaagtg
cagactcagaacattgagaatcataaatattccaaagaatcacatcaacttcccttgttc
aaactaaccaacaagcagggtaggagtcatacctttgtttttggaaattatccggacatg
aatgctttccgtgatattatcacaaaggcccttgctaaatgtgaagaggatcctaagaaa
tcaactgagcaactatgttttgcagacttggagctacgcgtcaagcttctccgagaaaat
agtgagttgcagagattgcataagcaatttgtggaaagtaaaactaataaggtgacattt
aactttacccctgagatcatttttcagttttttgctgagaagccggctgttcgacaggca
ttcataaattatgttccgagtaagataacagagaaagacttctggacaaaatattttaga
gcagaatatctttacagcaccaaaaacacagcagtagctgcagcagaagctactgaggac
gagctactcgctgtctttctgaagcctgatgagatatcggctcgagaagctcgtcgaaag
attcgacgagttgatccaactcttgacatggtggctgaccatgctggtgacgacactctt
agcatggaccaatgtatggatgttgctgaaccacataaagatctgtttaaaagaagatca
cttgcgcaagatattgatcgccatggtgctgctgtattggaaggcagatccattgatgtt
gagtcagaagattcgaggattgttgcagaggctctcacacgggttaaacacgcaagcaaa
gccaccaaagacgctgagcaggagagattggagaaaatgtcccgggctttaatggaagat
cttcaagcaccaaagaacttcgcgttcgaccctcgtgattactttgaatctcaacaagga
aacgtcctcaatgaaccgataggagcaggggaattaaagagaaatgtccatgaagcttat
gggttgctaaaagaatccatttctgagcttagattcaaaaaccatggcctatttgctttg
ttgcctaagctaagaaatgttatcgggaagaatccgcgagagaagtttctggacagatta
ccaaaatccatcaaggatgaaattttacatcaatggacatcaatacaagaattactaaga
catttttgttcatctttcccaataacaaccacatatctttataccaaggttcttaggctg
aaggatgcaatgtctaatatatattcacaactcgaggtgatgaaagagtcggtgcaatct
gatctccggcatgaggtttctttactggttcgtccaatgcaacaggctcttgacgctgcg
ttccaacagttgcatgacatgagtaaacatgtctataaagtccacttgaaaaactaa
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