Eutrema salsugineum (saltwater cress): EUTSA_v10011639mg
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Entry
EUTSA_v10011639mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00240
Pyrimidine metabolism
eus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
EUTSA_v10011639mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
EUTSA_v10011639mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-GeneID:
18011140
NCBI-ProteinID:
XP_006393141
UniProt:
V4KKH6
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MASSSALSRISTLQNHISPLEANNKLRSLVKISPEVSDAISNGRAVVALESTIISHGMPY
PQNLQTAKEVESIVRENGAIPATIAILNGVPCIGLNEEELERLASLGKSVQKTAGRDIAH
VVARRGNGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHTMDISSDLTALGRTPIAVI
SAGVKSILDIPKTLEYLETQEVYVAAYKSDEFPAFFTEKSGCKAPFRVDSPEDCARVIDA
NMKLNRQAGILFAVPIPKQHSAAGNIIESATQRALTEAREQKVTGSAETPFLLARVNELT
GGTSLAANIALVKNNALIGSQIAVALSQLI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttctgctctttctagaatctcgactctccagaatcatatttccccactt
gaagcaaacaacaagctcaggagtctggtcaagatatctccagaagtatctgacgccata
tctaatggacgtgccgtggtcgctcttgagtcaaccataatctcccatggtatgccttac
cctcaaaatctgcaaaccgcaaaagaggttgaatcaattgtgagagaaaatggagcaatc
cctgcaacaatagctatactgaacggagtaccttgcataggtcttaacgaagaagaacta
gaacgtcttgcatctctgggaaaaagtgtccaaaagactgcaggcagggacatagcacat
gttgtggctagaagaggaaatggtgcaactacagtctctgcaaccttatttttcgcttct
atggttggcatccaagtttttgtaaccggcgggataggaggtgtgcatagacatgctaac
catactatggacatatcctccgatcttactgcactcggaaggactcctatagcagtgata
tcagcgggcgttaaatcaatacttgatatcccaaagactcttgaatatttggaaactcaa
gaagtgtatgttgctgcatacaaaagtgatgagtttccggcatttttcacagaaaaaagc
ggctgtaaggcacctttccgggtagatagccctgaagactgtgctcgagtaatagatgca
aacatgaagctaaaccgtcaggcggggattctatttgcggttccaattccaaaacagcat
tcagccgccggaaatattatcgaatcagcaacacagcgtgctcttacagaagcgagggaa
caaaaagttactggaagtgcagaaactccatttttacttgctcgggtaaatgaattgact
ggaggcacgtcactagcagcaaacattgcgcttgtgaaaaacaatgcccttatcggttct
cagattgcagtagctctttctcagctgatttga
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