Eutrema salsugineum (saltwater cress): EUTSA_v10011787mg
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Entry
EUTSA_v10011787mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03015
mRNA surveillance pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10011787mg
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10011787mg
03015 mRNA surveillance pathway
EUTSA_v10011787mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10011787mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10011787mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EUTSA_v10011787mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
EJC/TREX
EUTSA_v10011787mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
18010638
NCBI-ProteinID:
XP_006393043
UniProt:
V4KGL4
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MANMESEAVDFEPEEDDLMDEDAGAVDAGDVSPRAGHMRLRSAIAGANGESAQRKTKGRG
FKDDKDSDRQRPLSSRDFESLGSDGGHGPQRSIEGWIILVTGVHEEAQEDDLTNAFGDFG
QIKSLHLNLDRRTGFVKGYALIEYEKSEEAQSAITAMNGAEILSQTVSVDWAFSKGPSFG
SYRRKNARSGRSQRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatggaatctgaagcagtcgattttgagccggaggaggatgaccttatggac
gaagatgccggagcagttgacgccggtgatgtttccccacgcgctggccatatgaggctt
aggtcagctatcgccggagcaaatggcgaatcggcgcagaggaagaccaaaggccgtggg
tttaaagacgacaaagattccgatcgccagcgtcccctttcctctcgcgatttcgaatca
ctcggttccgatggcggtcatggccctcagcgatccattgagggttggattattttggtc
accggagttcatgaggaggcacaggaggatgatttaacgaatgcttttggtgattttggt
cagataaagagtctacatctcaatctcgatcgccgtactggttttgtcaagggctatgct
ttgatagaatatgagaagagtgaagaagcacaaagcgctattacagcaatgaatggtgct
gagattctttctcagactgtcagcgttgactgggccttcagcaagggacctagttttgga
tcttacaggagaaagaacgcgaggtctgggaggtcacaacgttcacgaagcccgagaaga
cgttactga
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