Eutrema salsugineum (saltwater cress): EUTSA_v10011790mg
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Entry
EUTSA_v10011790mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10011790mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10011790mg
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10011790mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
EUTSA_v10011790mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EUTSA_v10011790mg
RNA polymerase III system
TFIIIB
EUTSA_v10011790mg
RNA polymerase I system
SL1/TIF-1B
EUTSA_v10011790mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
18011243
NCBI-ProteinID:
XP_006392632
UniProt:
V4KFG0
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQGMEGSQPVDLIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKMRDE
TYTAFENIYPVLTEFRKIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaggaatggaaggaagccagccagttgaccttatcaagcatccttcagga
attgttccaactcttcaaaatattgtctcaacagtgaacttagactgcaagcttgatctt
aaagccattgctctgcaggctcggaatgctgaatataaccccaagcgtttcgctgctgtg
atcatgaggataagagagccaaagactacagcgttgatttttgcttctgggaaaatggtg
tgtacgggagctaagagtgaacatctttcaaagcttgctgcgagaaagtacgctcggatt
gttcaaaagcttggcttccctgcaaaattcaaggatttcaagattcaaaatattgtaggc
tcctgtgacgtaaaattccccattaggcttgaaggtcttgcatactctcacagtgctttt
tcaagttacgagcctgagctatttccaggactgatatataggatgaaacaaccaaagatt
gtactactaatttttgtgtctggaaagattgttataactggagccaagatgagagacgag
acttacacagcctttgagaatatctaccctgttcttacagaattcaggaaaatccagcaa
taa
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