Eutrema salsugineum (saltwater cress): EUTSA_v10012314mg
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Entry
EUTSA_v10012314mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10012314mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10012314mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EUTSA_v10012314mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
EUTSA_v10012314mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
Tex_N
Tex_YqgF
AfaD
HHH_3
Motif
Other DBs
NCBI-GeneID:
18010520
NCBI-ProteinID:
XP_006392547
UniProt:
V4KR45
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
VEPVHGDPVDNADNDDEDEDDKGEDEYENDGFIVSDEEEEEEEEEEEEEEEEEEEEEEEE
EKQDSDGETQKKKRKRKEKDDLDEDDYLLLQDNNVKFEKRKYKRLKKAQRESENGQGGSS
DDELDGRGGAGRSTEDKIKDFLFDDDVDGDEEDLADDLGDEEDLAVEEDVVGSEDEMADF
IVNDDEKGHPRSGDAGKKKKRYRQGSDVSAMREGNEIFGGANALLRRKNRLASSEPSEPS
VQRRLEDNTEPSVLEEKYMTGKDEEICQLDIPERMQISEESTGSPPVDKTSIEEESNWIH
AQLSSLKKDSDGQRLHNFEGLFSVNKEDIAKFLELHHVQKLEIPFIAMYRKEQCRSLLDS
ADVDDLNIEKKPETKWHKVFWMIQDLDRKWLHIRKTKSRLLCSCNRFKGEPANGETTVDQ
DLLDSVISYLNLAETEREVEDARKKLNLHISANEFQGQYKRPPMKPGCSIYMKAGLREIL
NKFGCSAEKLGLALCQDILVEELEDAKETPEEMASNVMIENPQAVLEDARRMAAFEISHE
PSVKKYVRGIYMENAVLSTVPTVLGENVIKYGDDCHGVRWLDEKPLSKFEDAQWLLIQKA
EEKKHLEVTFELPKCHKDRLFSHFSKHYLSVAGCKYAELWNKERTLILKEALEEIILPSM
VAEARCLLTSRAKSWLLSEYGQALWNKVSARSYPKKRKDINSAEEAAPKVMACWGAGKTP
KTFVMLDSSGKVLKVLDTGSPSLRSQNVNGQQRRKSDQERVLEVMMDHQPHVVALGAVIT
RMVKEKPRDVGHWLNGLDIVVVNESLPRLYENSPISDQQLPQESAPVKRAVALGRYLQNP
LAMVATLCGPHREILSWKVHPLDYLLQDDEKYGMVEKVMVDIANQVGIDISLATIHQWLF
SPLQFISGLGPRKAAYLQRSLVRAGSRFVRKDLLEHGLGKKVFENAAGFLRIQRSGLAAS
SSFDDTRIHPESYGLAQELAKNYYIYDHDAIDDSSVDKDAIEMAIQHVRDRGASLRKDFL
DEYLASQKLENKKETCSNIMRELSCGFQDWRIRFKDSLEVMMISGKIKGNLNFLQRYARD
EDRIVNAKLKLRCGKAICELASGSIVDSGSMKDGFSDLGREIVEMSDRLKEGEIVYCKMG
LFKKEYPAKREKENRYEQVLFLWKETEFRNNMHQQNRDPYYHVDTNKLTRKVKKVRKYDD
IKTRMTNHPSFQNFTADKATEYLSDKDYGAYVFRPSSRGYYYFMLTLKIYDGVYVHKEVI
DSGKRSNSFPDICCIGQTLIIGEDTFHDLDHVIDEYVNPLVSHLKTLIKYRKFRKETKAR
IDELLRIEKGENPERIVYCFGISDEHPGTFILSYIRDRHPHHEDIGLYPKGFKFREMMFE
NIHKLVIYFHKHIDDRGSFGGGGWGGSQSEGGWKGNSDRSSGPRPGNPFKVGS
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
gttgagccggttcatggagatccagttgacaacgccgacaacgatgatgaagatgaagat
gacaaaggtgaggatgagtatgagaatgatgggttcatagtgagtgatgaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaggaggaagaagaa
gaaaaacaagatagtgatggggagacgcagaaaaaaaagaggaaacgaaaggaaaaggac
gatcttgatgaggatgattatctgcttctgcaagataacaacgtcaaattcgaaaagagg
aagtacaagaggttgaagaaagctcaaagggaaagtgaaaatggtcaggggggatcatct
gatgatgagcttgatgggagaggtggagctggaagaagtactgaggacaagatcaaagac
tttttgtttgatgatgatgttgatggcgatgaggaagatttagctgatgatttaggcgat
gaggaagatttagctgtggaagaagatgtagttggtagcgaggatgaaatggcagatttc
atcgtaaatgacgatgagaaaggtcatcctaggagtggagacgcaggtaaaaagaaaaag
agatataggcagggatcagatgttagtgctatgcgagagggtaatgaaatctttggtggc
gctaatgcgttgttaaggcgcaaaaatcgtttggcatctagcgaaccaagtgaaccaagt
gtgcaaagaaggctggaagataatactgaaccaagtgtccttgaggagaagtacatgaca
gggaaagatgaggaaatctgccaacttgatattcctgagagaatgcagatatctgaagaa
agcactggaagccctccagtagataaaactagcattgaagaagagagcaattggatacat
gctcaacttagttctctaaaaaaggattctgatggacaaagacttcacaattttgaagga
cttttctcggttaacaaggaggatattgcaaaatttttggagctacatcatgtgcagaaa
ttagagataccatttatagctatgtatcgaaaggaacaatgtcgcagcttgttggactct
gctgatgtcgatgaccttaatatagagaagaaacctgagaccaagtggcataaggtcttc
tggatgattcaggacttggatagaaagtggctccacattcgaaaaacaaaaagcaggttg
ctttgtagctgtaatcgtttcaaaggagagcctgccaatggtgaaactaccgtagatcag
gatctgctagattcagttattagttatctgaatttggcagaaacagaaagagaggttgag
gacgcgagaaaaaaactcaacttgcatatttctgcaaatgaatttcaagggcagtacaag
aggccgccgatgaaaccaggctgtagcatctacatgaaagcggggctccgggagatttta
aacaaatttgggtgtagtgctgagaaattgggacttgcattgtgccaagatatactggtt
gaagagctggaggatgcaaaggaaacaccagaggagatggcatcgaacgtaatgattgaa
aatcctcaagctgttcttgaggatgcacggcgtatggcagcatttgagataagtcacgag
ccatcagtcaaaaagtatgtccgtggcatttatatggagaatgcagtcctctcgactgtt
ccaacagtacttggggagaatgtaataaagtatggcgatgattgtcatggggttaggtgg
ttagatgaaaagccattgagcaagtttgaggatgcgcagtggcttctcattcagaaggca
gaagagaagaaacatcttgaagtaaccttcgagctacctaagtgtcacaaggatagacta
tttagccacttcagtaagcactatcttagtgttgctggttgtaagtatgccgaactctgg
aataaggaaagaacattgatacttaaagaggctctggaagaaatcattttgccatcaatg
gtagcagaagcaagatgcttgctaactagcagagcgaagagttggttgctttcagagtat
ggacaggctttgtggaacaaggtgtctgcaaggtcatacccaaagaaacggaaggacatt
aactcagctgaggaggctgcaccgaaggtcatggcatgttggggagctggaaagacacca
aaaacgtttgtgatgctggattcatcgggaaaggtgcttaaagtgcttgatactggatcc
ccctcactgcgatctcaaaatgtcaacggccagcaacgtagaaagagtgaccaggaacgt
gttttagaggttatgatggaccaccaaccgcatgttgtggctttaggagctgtcattacc
cggatggtaaaggaaaagccaagagatgttggacattggttgaatggtttagacattgtt
gttgtgaacgaatcgcttccaaggctatatgaaaattctccaatctcagatcaacagcta
cctcaggagtctgcgcccgtgaaacgtgcagttgctcttggacgctatttgcagaatcca
ctagcaatggtcgcgactttatgtggtccacacagggaaattttgtcttggaaggttcat
cctttggactacctgcttcaggatgatgagaagtatggaatggttgaaaaagttatggtt
gacatagctaaccaggttggcatcgacattagtttggcaactatccaccagtggcttttc
tctcctttacagttcatttctggacttgggcctaggaaagctgcatatttgcagaggtcg
cttgtacgagctggttcgagatttgtccgcaaagacctgttagaacatgggcttggtaaa
aaagtttttgaaaatgcagctggtttcttgcgcatccagaggagtgggctggctgctagt
agtagttttgatgacactcgaatacatcccgagtcatatggtcttgcacaagaattggcg
aagaattattatatatatgatcatgatgctatagatgattccagtgttgataaggatgcg
attgagatggcaatacagcatgtgagagatcggggagcctctttgagaaaagatttcctt
gatgagtatcttgcaagccagaagctggaaaataagaaggaaacgtgcagtaatatcatg
agagaattaagctgtggtttccaggattggcggatacggtttaaagatagtttggaagtc
atgatgatctctggcaaaattaaaggtaacctaaattttttacagaggtatgctagagac
gaagacagaattgtaaatgccaagctgaaattgcgctgtggaaaagccatatgtgaatta
gcttccgggtctatagtagattctgggtctatgaaggatggtttctcagatcttgggaga
gagattgttgagatgtcggaccgactgaaagaaggtgaaattgtatactgcaagatggga
ctttttaagaaagagtatccagcaaaaagggaaaaagagaatagatatgaacaagtgctc
tttctttggaaagagactgagtttagaaacaacatgcaccaacagaatcgggatccctat
taccatgtggatacaaacaagttaactcgaaaagtaaagaaggtgagaaagtatgatgat
ataaagactcggatgacaaaccatccttctttccaaaacttcactgctgacaaagcaaca
gagtacttgtctgacaaagattatggagcatatgtttttcgtccaagttctcgaggatat
tattattttatgctgacgctaaagatttatgatggagtttacgttcacaaggaggtcatt
gactctggaaaaagaagtaacagttttccagacatatgttgtatcgggcaaaccctgata
attggagaggacaccttccatgatctagatcacgtaatcgatgaatatgtcaaccctctg
gtctctcatctcaagaccctgattaagtatcggaagtttcgaaaagagacaaaagcaaga
atagatgagcttctaaggatcgagaagggtgaaaatcctgaaaggatagtttactgtttt
gggatttctgatgaacatccaggcacctttatactgtcttacataagagacagacatcca
catcatgaagatattggtttatatcccaagggatttaagttcagggaaatgatgtttgaa
aacattcacaagttggtgatatactttcataagcatattgatgaccgtggctcttttgga
ggaggtggttggggtggttctcagagtgaaggaggctggaaaggaaactcagatcgctca
tctggaccaagaccaggtaatcctttcaaagttggttcgtaa
DBGET
integrated database retrieval system
