Eutrema salsugineum (saltwater cress): EUTSA_v10012417mg
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Entry
EUTSA_v10012417mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10012417mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
EUTSA_v10012417mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_4
PHD_2
zf-HC5HC2H
INTS1_R4
API5
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
18018158
NCBI-ProteinID:
XP_006400074
UniProt:
V4LGL3
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MSNPSSSGWGSSSSLTQFGIGLANTVQSEVAPHLPLPSLPIFCGATEPGEFKLFDEVNQG
SSGNRSLNRTEILSQSCRIASLLEETDVSYLDLRNEARALSCNSEEPFQLYDQVLRFKPR
AFDIVTPGPTYDPVFINEEPKKRKSEPSIPVKIQRQTDHHLARNIQPDPVKRVLRSNHIE
DHSWQAEPLTNQLPRDDIAIHDSRPETISMNESSASKKPKGKKRRKDDLSSVQPDPSVLQ
ESIVKSFCEMLEDFCSRAEVPGDDRDEAEWSSLPVNDVRVLVNELMTIRSKMLLHMVPVD
ILSRLLHTLDHQIHRAEGLSINSEHSDSDSVLLVLGALESIHASLAVMANSDMPKQLYKE
EVIERILEFSRHQMMAVMSAYDPSYRTASKPADNVAFEGDDDDDDPDPDMGSASKRRRTG
KSGKVKKSGVNRISGAVNTALQKLCTILGLLKDLLLVERLSDSCILQLLKTSITTFLVEN
IQLLQLKAISLIGGIYNSYAQHRTYVIDELSQLLWKLPSSKRALRAYLLPDEEQKQIQMV
TALLIQLVHNSTSLPETLRQASSGNSILETPVDAGYLTKCHEAATETCCLFWTRVLERFA
SLKAQDASEIKVMIENLVNDLLTALNLPEYPSVSPILEVLCVILLHNAGLKSKDVSARSM
AMELLGTIAARLKKDAVLCSRDRFWTLLESDSETRVDEVGTKDCALCLGKRAGNLLVCQI
CQRWFHPDCLGLKELDISSRNWHCPFCVCKRQLLVLQSYCKTDTKSTGKLESEEDSNMIT
QTEVVQQMLLNYLQDAGSADDVHTFICWFYLCLWYKDVPKSQKKFKYYIARLKAKSIIRN
SGATTSFLTRDAIKKITLALGLHNSFSRGFDKILHMLLASLRENSPIIRAKAMRAVSTIV
DSDPEVLCDKRVQLAVEGRFCDSAISVREAALELVGRYIASHPDVGLKYFEKVAERIKDT
GVSVRKRAIKIIRDMCTSNPNFSEFTSACTEILSRISDDESSIQDLVCKTFYEFWFEEPP
GHHTQFASDASSIPVEVEMKTNQMVGLLRRTPNHQLLVTIIKRALALDFFPQATKAAGIN
PVALASVRRRCELMCKCLLEKILQVEEMSREEGEGQVLPYVLVLHAFCLVDPGLCTPASD
PTKFVITLQPYLKSQVDSRIGAQLLESIIFIIDSVLPLIRKLPLSVTEDLEQDLKHMIVR
HSFLTVVHACVRCLCSVSKLAGKGVSVVEHLLQFFFKRLEAQGSDNNQIAGRSLFCLGLL
IRHGNSLISTSGGRNFNLSGCLNLFKRHLCTEDFALKVRSLQALGFILIARPDYMLEEDI
GKIIDSTLSDEANGRMKMQALQNMYEYLLDAEKQLGSDKAGDNTVNPIEQGGHNVPVAAG
AGDTNICGGIVQLYWDKILGRCLDFDDQIRQTALKIVEVVLRQGLVHPITCVPYLIALET
DPLEANQKLAHHLLMNMHEKYPAFFESRLGDGLQMSFIFMQSISQVTSESNQIPQQKGST
NTPGNGLTQARLGVSRIYKLIRGNRISRNKFMASIVRKFDNPTWSGSVIAFLMYCTETLA
LLPFTTPDEPLYLVYSINRVIQIRAGAIESNLKTLLHKDSAKPQHGNGTYQQDPILGHMH
TMDLNTRIQEEPTHWNSYGHPTPIDLNGVVYQDPRDQFTTYQTHNGEANVHKMTSSDPPE
LSIDDQQKIQVDCLSAIALQLLLKLKRYLKVTYSLNDDRCQAYSPTEPLKPGDPLSKQSV
AFDLSETRTDLPSTYQDLVERYQEYKNSMREDTLDYTIYSTNVKRKRPTPRKGTRSAKKA
VAYNEDDGDDDDDDRGWNGGRGGGRMTARRLNYSTRSSNRR
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccaagcagttccggatggggctcaagctcgagtttgactcagttcggaatc
ggtttggccaatacagtgcagtcggaggttgctcctcacttgccgctaccgtcgttaccc
attttctgcggcgcgacggaacctggggagttcaagctcttcgatgaggttaaccaaggt
agtagcggcaacaggtcattgaatcgcactgagattctctcgcaatcctgtagaatcgct
agcctgcttgaagaaactgacgtttcttacctggatcttagaaacgaagctagggcgctc
agttgtaattctgaggagccttttcagttatatgaccaagttctacgattcaaacctaga
gcatttgatattgttacccctggtccgacctacgatccagtctttatcaatgaagaacct
aaaaagagaaaatctgagccaagtattcctgtcaagattcaacgacagacagatcatcat
ttagctaggaatatccagcctgatcctgtgaaaagggtcttacgatcaaatcatattgaa
gatcatagttggcaggctgaacctttgacaaaccagttaccgagagatgatattgcaatt
catgactctcggcctgaaacgatcagcatgaatgaatcttctgcttccaaaaagccaaag
ggcaagaagagacgtaaagatgacctgtcttcagttcaaccagatccatctgtgcttcaa
gagtccatcgtaaaaagcttttgtgagatgttggaggacttctgtagcagagctgaagtc
cctggtgatgatagggatgaagcagagtggtcatcactgcctgttaatgacgttcgcgtt
cttgtgaatgaattgatgactatacggtcaaaaatgctcttgcatatggtacctgttgat
attctatcgaggttattgcacactctggatcatcagatacatagggcagaaggcttgtcc
attaatagtgagcattcagattcagattctgttttgttggttctcggtgcccttgagtca
atccatgcatcgcttgcagtgatggctaacagtgatatgccaaagcagctctacaaggaa
gaggtaattgagagaattttagagttttctcggcaccaaatgatggctgttatgtctgct
tatgatccatcataccgcaccgcaagtaaaccggcagataatgtggcatttgaaggtgat
gatgatgatgatgatcccgatcctgacatgggctcagccagcaaaaggcggcgcacagga
aaaagtggcaaagtgaagaagtcaggagtgaacaggatatctggagcagtgaatactgca
cttcagaaactgtgcactattcttggtttactcaaggacctgttgttggtagaaaggtta
tctgacagttgcattttacaactgttgaagacaagtattaccacatttttggtggaaaat
atccaacttctgcaacttaaagcaattagcttaattggtggtatatataattcatatgct
caacatcgaacctatgtgatagatgagttatctcaattgctttggaagttaccttcctcg
aaacgagcattgagagcgtatcttcttcctgatgaagaacagaagcagattcaaatggtc
actgctttgctcattcagttggttcacaacagcacaagccttcctgaaaccctgagacag
gcttccagtggaaactccatactggagaccccagttgatgctggttacctaactaaatgt
catgaggcggctacagaaacatgttgccttttctggactcgtgtccttgaacgttttgcc
agtttgaaggctcaggatgcttctgagataaaagtgatgattgagaaccttgttaatgat
ttgctgacagcactgaatcttcctgaatatccatcagtgtcccctattcttgaggttctc
tgtgtcatactgctgcataatgcagggttgaaatcaaaagatgtctctgcccggtcaatg
gccatggaactgctaggtaccattgctgcaaggttgaaaaaagatgctgtcctctgcagt
agagacagattctggacgttactagaatcagatagtgaaactagagttgacgaagttggc
acaaaagactgtgctctttgtttaggcaaaagagctgggaacttattggtctgtcaaatt
tgtcaaaggtggtttcatcctgactgtttgggtttaaaggaactagacatttcaagtcga
aattggcactgtccgttttgcgtatgcaagaggcaacttcttgtactgcaatcttactgc
aagacggacaccaagagtactggtaagttggagtcagaagaagactcaaatatgattaca
cagacagaagttgtgcaacagatgctcttgaattaccttcaggatgcaggatctgctgat
gatgtgcatactttcatttgctggttttatctgtgcctttggtataaagatgtcccaaaa
tctcagaagaaattcaaatattacattgctagactgaaagcaaagtcaataatccgtaat
tctggagcaactacgtcgttcttgacaagagatgctattaaaaagattacattagctctg
ggactgcataattccttttccagaggatttgataagattctacacatgctcctggctagt
ttaagagagaactctcccattattagggccaaagctatgcgagcagttagtacaattgtt
gattctgatccagaggtattgtgtgataagcgtgttcagttggctgttgaaggaaggttt
tgtgattctgcaatatctgttagagaagcagcactggaacttgttggtaggtacattgca
tcacatcctgatgttggtttaaagtactttgagaaggtcgctgagaggattaaggatact
ggagtgagtgttcgaaaacgagccatcaagataatacgtgacatgtgtacttcaaatcca
aacttctctgaatttacaagtgcatgtactgagatattatctcgtatcagtgatgatgaa
tctagcatccaggatcttgtgtgcaaaactttctatgaattttggtttgaggaacctcca
gggcatcatactcagtttgctagtgatgctagctccattccagtcgaagtggaaatgaaa
accaatcaaatggttgggttgttaaggaggaccccaaatcatcagcttcttgtaacaatt
attaagcgagccctggcccttgatttttttcctcaagcaactaaagctgctggtatcaac
ccagttgctcttgcatcagtgcgcaggcgctgcgagctgatgtgcaagtgtttactggaa
aaaatattacaggtagaagaaatgagccgtgaagaaggagaagggcaagtgcttccttat
gtacttgttctgcatgctttttgtctcgtggatcctgggctgtgtacaccggcgtcagac
cctactaaatttgttatcaccttacagccatatctgaagagtcaggttgatagtagaata
ggagcacagttactagagagtattattttcattatagattctgtcctacccttgatccgc
aagctgccgcttagtgtgacagaagatctggagcaagatctaaagcatatgatcgttcgg
cactcgtttctaaccgttgttcacgcttgcgttaggtgtctctgttctgtgagtaaattg
gcgggaaaaggtgttagtgtagttgagcatcttcttcagttcttttttaaacggctggaa
gcccaagggtccgataacaaccagattgctgggcggtcccttttttgtcttggcttgctt
attcggcatggaaactctcttattagcacctcaggtggcaggaatttcaatctttctggc
tgtctcaatttgttcaaacgacatctctgcacagaagattttgctttgaaagtcaggtcc
ctgcaggctttaggttttattctaattgcgcggcctgattacatgctggaagaagacatc
ggaaagataatcgatagtacattatcagatgaagcaaacgggcgtatgaagatgcaagca
ttacaaaacatgtatgagtaccttcttgatgcggaaaaacaattgggatccgataaagct
ggtgataacacggttaacccaattgagcaaggtggccataatgtacctgtagccgctggt
gcaggtgacaccaacatttgcggaggcattgtgcagttgtattgggataagatattaggt
agatgtttggacttcgatgatcaaatccgccagactgctctcaagatagtggaagttgtg
ctacgtcaaggtcttgttcatcctattacatgtgttccttatctgattgcccttgagaca
gatcctctagaggccaaccaaaagctggcacatcatttgctaatgaatatgcatgagaag
tatccggcgttttttgaaagccgtctcggtgacggacttcaaatgtcgttcattttcatg
caatccattagccaggtcacttcagaatcaaatcaaattcctcagcaaaagggttcgaca
aacacgccggggaacggtctcacacaagctagacttggagtctctagaatctacaagctt
atccgtggaaaccgaatttctcggaacaaatttatggcttctattgtacgcaagtttgat
aatccaacctggagtggctcagtgatagcctttctgatgtattgcactgaaacccttgct
ttacttccattcacaacacctgatgagccgctctatcttgtatattccataaaccgagtt
atacaaatccgggctggtgcaatcgagtcaaatttgaagactttgttacataaagattcc
gcaaagcctcagcatggaaatggaacgtaccaacaagatccgatcctcggacatatgcac
acgatggatttaaacacaagaatccaagaagaaccaacgcattggaattcgtatggccat
ccaactccaattgatctcaacggagtagtataccaagatccgagggatcaatttactaca
tatcaaacccataatggggaagcaaatgtgcacaagatgacctcatctgatccgcccgaa
ttatccatcgatgatcagcagaaaattcaggttgattgcttatcagctatagctttacaa
cttcttttgaagcttaagagatacttaaaagtcacgtacagcttaaacgatgaccggtgc
caagcctattctccaacggaaccattgaagccaggagatcctctgtccaaacaaagtgtt
gcctttgacctcagcgaaactcgcactgacttaccttcaacatatcaagacttagttgag
agatatcaggagtataagaactcgatgagagaagatactcttgactacacaatttattca
accaacgtcaagaggaaacggccaacgccgaggaaaggcacaagatcagctaaaaaagca
gtggcctacaatgaagatgatggtgatgatgacgatgatgacagaggttggaatggagga
agaggaggaggtcgtatgactgctcggagattaaattacagcaccagaagtagcaataga
aggtaa
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integrated database retrieval system
