Eutrema salsugineum (saltwater cress): EUTSA_v10012430mg
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Entry
EUTSA_v10012430mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10012430mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10012430mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
EUTSA_v10012430mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
HECT type E3
EUTSA_v10012430mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
IFRD
Motif
Other DBs
NCBI-GeneID:
18019119
NCBI-ProteinID:
XP_006398744
UniProt:
V4LK70
LinkDB
All DBs
Position
Unknown
AA seq
1503 aa
AA seq
DB search
MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANGTSSGHENADADMDTSSSA
SHSSRSDEEQDKDSDYGSCDSDDADPRQRVLQEYQRGRSSDDQGKLNSLLSSLTAETDPS
LQLTGLTELCEVLSFCTEDSLSSGMADSLSPMLVKLAKHESNADIMLLAIRAITYLCDVY
PRSVAFLVRHETIPALCQRLLTIEYLDVAEQCLQALEKISRDQPVACLNAGAIMAVLSFI
DFFSTSIQRIAISTVVNICRKLPSESPSPFMDAVPILCNLLQYEDRQLVENVAICLTKIA
DQVSQSPALLDQLCRHGLIHQSTHLLNLNSRTTLSQPVYNGVIGLLRKLSSGSTLAFRSL
YELNIGYRLKEIMSTYDISHSVSSTHPINACSNQVHEVLKLVIELLPASPVEGNQLALEK
ESFLVNQPDLLQQFEADMLPAMIKVLNSGANVYVSYGCLSAIHKLTCLSKSDDLVELLKN
ANISSVLAGILARKDHHVVVVALQIAEVLLEKYRDAFSNSFIKEGVFFAMEALLSSDRGQ
QNPVSGFIQGSADFSQKPVVKENGKCLCQSFEKSLSSSSQTCKIETDSVYILATRIKKSF
FGPGVFDSEKGLTDVLQNLKNLSVALGDLMTVPNDSHVLHDEKFLSIWNQIMERLNGRES
VSTFEFTESGIVKALANYLSNGLYQRKIIKGDPECDSLPFVGKRFEVFTRLLWSDGEATS
SVLIQKLQSSLSSLENFPIVLSQSLKQRNSFAAVPNGRCTSYPCLRVRFVKAEGETCLRD
YSQDFVTVDPLCYVDDVDQYMWPKVNLEPLHSVGAEDEAIECQSSQLQSTSISCQGESSS
HMDIDSSDATQLQGSQEEEQEQLRGLCNGSGEENISSSEKEDPLPRLLFRLEGLELDRSL
TVYQAILLHKLKSENETTNGSKLSGPHDITYERAPQLADSHENVFPLESMDNDEYHPLLS
YLFAHRLALRLKGTSPLAYDILFLLKSLEGMNRFLFHLICHERVNAFGEGRLDDLDDLRV
QVRPVPYAEFVSSKLTEKLEQQLRDSFAVSTCGLPPWFNDLMDSCPFLFSFEVKSKYFRL
AAFGSQQVHHHPQHLSSSNVHGEGRPASGSLPRKKFLACRENILESAAKMMELYGKQKVV
VEVEYNEEVGTGLGPTLEFYTLVSRAFQNPDLGMWRSTRSFVGKSSEDPGALGYASGLFP
RPWSGTSAAFPGVLQKFVLLGTVVAKALQDGRVLDLPFSKAFYKLILGQELSSFDIHFVD
PELCKTLVELQALARRRKVIAEAQSDSRAAMYDLSFRGTKIEDLCLEFALPGYTDYVLDL
HYANDMVNLDNLEEYIKAIVNATVCNGIRKQVEAFRSGFNQVFPIEHLLIFNEEELETML
CGERDLFNMNEVLDHIKFDHGYTSSSPPVEHLLEILHEFDKEQQRAFLQFVTGCPRLPPG
GLASLNPKLTIVRKHGSDSSETDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSF
HLS
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagaggccagaaacgaatggaggttgtggaagagctacctgctgataagaga
gcttgtaactcacaagatttcaggccaagcacatctggatcatctgtccaagctcaagct
aatggcacgagttcaggacatgaaaacgctgacgctgacatggatacttcttcatctgct
tcccattcgagtcgatcagatgaggaacaagacaaggattccgactatggatcttgcgat
tctgatgatgctgatccgaggcagagggtgcttcaggaataccagagagggagatcatct
gatgatcaagggaaattgaattcactcttgtcgagtttgactgcagaaaccgatccttct
ttgcagttaactggtcttacagagctatgtgaagtgctgtctttttgtactgaagattca
ctgtccagcggaatggccgacagtctctcgcccatgcttgttaagttagctaagcacgag
agcaatgcagacatcatgctgctcgccatcagagcaattacttacctgtgtgatgtttac
ccacggtcagtagcatttcttgtaagacatgagactattcctgctctctgccaaagacta
ttgactattgagtacttggacgttgctgagcagtgtttgcaagcacttgagaaaatatcc
cgagatcagccagtagcatgcttgaatgctggagcaattatggcagtgctttcttttatt
gatttcttctcaacaagcatacagagaatcgcaatttctactgtggtgaatatatgtagg
aagcttccatctgagtctccctcccctttcatggatgctgttccaatattatgcaatctt
cttcagtatgaagatcgacagttggtcgagaatgtggctatatgcttaacaaaaatagca
gatcaagttagccagtcacctgcattgttggatcaactgtgtaggcatggactaattcat
cagtccacacatcttttaaacttgaatagccgcactaccctatctcaacctgtttacaac
ggcgtgattgggttgctaagaaaactatcttctggttcaactttagcttttagatcgtta
tatgagcttaacattggctacagactaaaagaaattatgtccacgtatgacatttcacat
tcagtgtcttctacacatcccatcaatgcatgttccaaccaggtgcatgaagtattgaag
ttggtaatagagcttcttccagcttcacctgtagagggtaatcagcttgccttggaaaag
gaaagtttccttgtcaatcagcctgatctcttgcaacaatttgaagccgacatgcttcct
gctatgattaaggtgctaaattctggagctaacgtatatgtttcttatggttgcctatca
gcaattcacaagctgacatgtttgagtaagtcagacgatcttgtcgagttactgaagaat
gctaacatttcaagtgttttggcgggcattttggcaaggaaagatcatcatgtggtcgtt
gtagcactacagattgctgaagtgcttcttgagaaatacagagatgctttttcgaattcc
tttataaaggagggtgttttttttgcaatggaagcactcttaagttctgatagggggcag
cagaatccagtatctgggttcattcaaggatcagctgacttttcacaaaagcctgttgtg
aaagagaatgggaaatgcttgtgccagtcttttgaaaaatcactttcctcttcttcacaa
acttgtaagattgaaactgattctgtctacattctcgcaacacgtatcaagaagagtttc
tttggacctggggtattcgactctgagaaaggcttgacagatgttctccaaaacctcaag
aacttgtcggtagcacttggcgatttgatgactgtacctaatgattcacatgtcttgcat
gatgagaagttcttgtcaatatggaatcaaatcatggaaaggctgaatggacgggaatct
gtgtccacttttgaatttacagagagtggaattgtaaaggcgctggcaaattacctgtct
aatggactctatcaaaggaaaattatcaaaggcgatcctgaatgtgatagtttaccattt
gttggtaagagatttgaagtgttcacaagattactttggtctgatggcgaggcaacttca
tccgtgttaatacagaagctccaaagttccctatcttctttagaaaactttccaattgtt
ctaagccaatctttgaagcaaaggaactcattcgcggctgttccgaatggacgttgcaca
agttatccatgcttaagagttcgttttgttaaagcagagggagagacttgtttgcgtgat
tactcccaagactttgtcaccgttgacccactttgctacgtggatgatgtcgatcaatac
atgtggcctaaagtgaatttggaacctttacattccgtcggagcagaggatgaagctata
gaatgtcagtcttctcaattgcagtcaacttcgatatcttgtcaaggtgaaagctcaagt
catatggatattgacagttctgatgcaacacagttacagggatctcaagaggaagaacag
gagcagcttcgagggctatgtaatggttcaggagaagagaatatttcctcatctgagaag
gaggatccgctacctagacttttgtttcgtctggaagggcttgaactagaccgctctttg
actgtataccaggcaattctcttgcacaaactaaaatctgaaaatgaaactaccaacggt
tcaaagctgagtggaccgcacgacatcacttatgaaagggctccacaacttgcagattct
catgaaaatgtgtttcctctcgaatctatggacaatgatgagtatcacccgcttctatcc
tacttgtttgctcatagacttgctttgcgcctcaaagggacaagtcctcttgcgtatgac
atattgtttctgcttaagagtctggagggcatgaacagatttctctttcacctgatttgt
catgaaagggttaatgcttttggtgaaggtaggctggacgatttggatgatctgagggtg
caggttcgtcctgtgccatatgctgaatttgttagtagtaagcttacagagaagttagag
cagcagctgcgtgattcgtttgcggtgtcaacctgcggtctgccaccatggtttaatgat
ctaatggattcatgcccgtttctgtttagttttgaagtcaaatctaaatacttccgactt
gcagccttcggttcacagcaagtccatcatcatccacaacaccttagcagttcaaatgtt
catggcgaagggcgtccagcgtctggcagtttacctcgaaaaaagttcttagcttgccgg
gaaaacattctagagtctgctgcaaaaatgatggagttatacggcaaacagaaggtggtc
gttgaggtggaatacaatgaagaagtcggaactggtcttggcccaacactggagttctat
acacttgtcagtagagcatttcaaaatcctgatctcggtatgtggaggagtactcgatcc
tttgttggaaaatcaagcgaagacccgggagctttggggtatgcttcaggactctttcca
cgcccttggtcaggtacatcagcagcttttccaggtgtgttgcagaaatttgttcttttg
gggacagtggtagcaaaggctctacaagatggacgagtcttagatcttcctttctccaaa
gctttctataaacttattctcgggcaggagttgagttcatttgacatccacttcgttgac
cctgaactttgtaaaacactggtggaattgcaagctctggcacgtaggagaaaggttatc
gcagaagcacaaagtgattcccgagcagccatgtatgatttaagtttccgtggaacgaag
attgaggacctttgtcttgaatttgcgctgcctggctacacagactacgtcctcgatctc
cactatgctaatgacatggtaaatttggataaccttgaggaatatatcaaggctattgtc
aatgccacagtatgtaacgggatccgaaaacaagtggaagcattccggtcgggatttaac
caagttttccccattgaacatcttctgatattcaatgaagaagaactggaaactatgttg
tgtggagaacgcgatctctttaatatgaatgaagtcttggatcacatcaagtttgatcat
ggatatacttctagcagtccaccagttgaacatttgctggagattctgcatgagtttgac
aaggagcaacagcgagcttttctgcaatttgtaaccggatgtcctcggttacctcctggc
ggtttggcgtctctcaatcccaaacttacaattgtccgcaagcacggtagcgattcttca
gaaaccgacctgcctagtgtgatgacatgcgccaattatctgaagcttccaccttactct
tccaaagaaaagatgaaggagaagttgatttatgccataactgaaggtcaaggttccttt
catctctcttaa
DBGET
integrated database retrieval system
