Eutrema salsugineum (saltwater cress): EUTSA_v10012457mg
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Entry
EUTSA_v10012457mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10012457mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EUTSA_v10012457mg
Factors involved in mRNA localization
Other mRNA localization factors
EUTSA_v10012457mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
18018798
NCBI-ProteinID:
XP_006400386
UniProt:
V4LDQ1
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRLINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQCAWKF
SRPCRDAAETQDASGSYSDYEKVVRYNYTVEERKALVELVGFIKSVGSMLQRCDTLVADA
LWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEMPSSQH
GGDESKGNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVNDLKQL
ETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLIDYVLE
AQNPGLLESVLLSFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSESIFTYY
KSWSASELLDPSFLFALDNGEKFYIQPVRFTALFKMTKVKLLGRTINLRSLIAQRMNKIF
RENLEFLFDRFESQDLCAVVELEKLVDILKHSHELLSQDLTIDPFSLMLNEMQENISLVS
FSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGTQDLNA
AHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGLQEALP
KSIGLLSFDGGVTGCMRLIREQLNWGTKSELKSEVLRGIKEIGSVIYTMGLLDIVLREVD
TKRFMQTAPWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQ
AEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFIDITTSKDFYRIYGGL
QIGYLEEITVPQSVQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSA
SHAHRNNPQTLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVR
FENTVSAFETLPQKGTVG
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctgtcgaggaagcaatcgcagctctttccacattctccttagaggatgag
caaccagaagttcaaggaccggctgtgatggtttcagctgaaagagcagcaactgatagt
cccatcgagtatagtgatgttgcagcataccgtttgtctctatctgaagacacaaaagct
cttaaccagctgaatacgcttatacaagaaggaaaagagatggcgtcaattttatacaca
tatagaagttgcgtcaaagcactgcctcagcttcccgaatctatgaagcatagtcaagca
gatttgtatctagaaacatatcaagttttggacttagaaatgagccgtttacgcgaaatt
cagagatggcaatcgtcggcttctgctaaattagctgctgatatgcagcgattttccaga
cctgaacggcggatcaatggccccacagttacgcatctgtggtcaatgctaaagttgctt
gatgtcttggttcagcttgatcatcttaaaaatgctaaagctagcattcctaatgatttc
tcttggtataaaagaacattcactcaagtcagtgcccagtggcaagatacggatacaatg
agagaagaattagatgacttacagattttcctgagcaccagatgggctattttactcaac
ttgcatgttgagatgttccgtgtgaacaacgtggaagacattctccaagttcttatagtc
ttcatcgttgagtctctggaattggatttcgcgctcctttttcctgagcggtacattctt
ctccgcgtcttgcccgttcttgttgtcttagcaacgccatctgagaaagataccgaggct
ttatacaagagggtaaagctcaacaggctgatcaatattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttctcctgctgctatattgaaagaactgtcagtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgtgaagcgctagaatatcagaggcactatttgatagtcaatcacattggagctctc
cgtgctgagcatgacgatttcacaatccgatttgcttcatccatgaatcagtcaaacgac
ggagcatatacagaatggtgtagagaggtcaaaggaaacatgtacgatatggttgttgaa
ggtttccaactgttaagcagatggactgcacgcatttgggagcaatgtgcttggaaattc
tctcgcccgtgtagggatgcagcagagactcaagatgcttccggttcatattctgattac
gagaaggtggtgaggtacaattatactgtagaagaaaggaaagctttggtagaacttgtt
ggctttataaagagtgtaggatcgatgctgcagcgctgtgacacattagttgcagatgct
ttatgggagacaatacatgctgaagttcaagattttgtacaaaacacgttagccacgatg
ttgcgtaccaccttccgaaagaagaaagatctctcaaggattctttctgatatgcggaca
ctttcagctgactggatggcaaataccaggcctgaacatgagatgccatcttcgcaacat
ggaggtgatgaaagcaaagggaacttcttttatccgaggccagttgccccaacagcagca
caggttcattgcttgcagtttttgatatatgaagttgtctctggtggcaatctgaggagg
ccagggggattctttggaaataatggctcagagattcctgttaatgacttaaaacaattg
gagactttcttttacaagctcagcttcttcctccacatattggattactcggcaagtatt
ggaatattgactgatctcgggttcctgtggtttagagaattttacctggagtcttcacgt
gttattcagttccctattgaatgttcactaccatggatgctgatagactacgttcttgaa
gcccagaatccgggccttcttgagagtgttctgctgtcttttgacatttataatgactca
gcgcaacaagccctggttgtactgaggcagaggttcctctatgatgagatagaggctgag
gtggaccatggttttgatatatttgtttcaagactctcggagtctatattcacgtattac
aagagttggtcagcaagtgagcttcttgatccgtcatttctctttgccttggacaatggt
gaaaagttctatatccagcctgtgaggtttactgcgttatttaagatgacaaaagtaaag
ctacttggtagaacaattaatttgagaagtttgatcgctcaaaggatgaataaaattttt
agagagaatctagagtttctctttgaccgttttgagtcgcaggacctatgtgctgtagtg
gaactagagaagctcgtagatattttaaagcactcgcatgaactgctctcacaagatctt
accatagatcctttcagcctcatgctgaatgaaatgcaagaaaacatttctcttgtctca
ttttccagtcgacttgctacacagatttggtcagagatgcagagcgatttcctaccaaac
ttcattctttgcaataccacacagcgatttgtccgctcatctaaagttcctcctactcag
aaaccatcagtgccttctgctaagcctagtttctactgtggcactcaagacttaaatgca
gcgcatcaaagttttgcccgattacacagtggatttttcgggataccacatttgttttcc
atagtgaaacttcttggatccagatcattgccttggcttataagagctttgctggatcat
atatcaaataagataacaacacttgagccaatgatctctggactgcaagaagcattgccc
aagtctatcggattgctttcttttgatggtggtgtcacaggttgtatgaggcttattaga
gaacaactaaactggggcacaaagtcagaactcaaatcagaagttcttcgtggaataaaa
gaaattggaagtgtgatatatacaatgggacttctcgatatcgtcttgagagaagtagac
acaaagcgtttcatgcaaacagctccatggttaggattaatcccgggcgcagaaggacag
atagttaacgctcaagacggcgaaagcccacttgtcaatctcttaaagtcagcgacttct
gcggttgtatcaagtcccggttgtcttaatccagcagcgttctacaccatgtccaaacag
gcagaagctgcagatcttttgtataaggcaaacatgaacggtggaagcgttcttgaatac
acacttgcattcacaagtgcgtcacttgacaaatattgtagcaaatggagtgctcctcca
aagacaggtttcatcgacattacaacttcaaaggatttttaccgtatttacggtggtctt
cagatcggatatctggaggagataacagttccacaatcagttcaacacgaagtccttggt
gattcaatagcttggggtggttgcaccatcatatatttgctcggacagcaacttcacttt
gagttgtttgatttctcgtaccaagtactcaatgtctctgaggttgaaactgtgtcggct
tcacatgctcataggaataatcctcaaactctccagggatgggaaggtttgttggaaggg
atgaagaaagctcggcggctgaataaccatgtcttctctatgcttaaagctcgttgccct
ctagaagacaaaacggcttgtgccatcaagcaaagcggcgcaccgttaccacgtgtcagg
tttgagaatacagtgtctgcttttgagactctgcctcagaaaggtaccgttggctga
DBGET
integrated database retrieval system