Eutrema salsugineum (saltwater cress): EUTSA_v10012460mg
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Entry
EUTSA_v10012460mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10012460mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10012460mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
EUTSA_v10012460mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
AP3D1
Motif
Other DBs
NCBI-GeneID:
18017069
NCBI-ProteinID:
XP_006400609
UniProt:
V4LI40
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MKKKRFYDLKHPFDPCPFEIFSSGTWKAVEYLRIEDGKMTIRLVENVYVLEDIRPFQRLR
LRSRKATLSDCTCFLRPGIDVCVLYPLYEDDPEPVWVDARIASIERKPHDSECSCKIYVR
IYIDQGCIGSERQRINRDSVLIGLNQISILQRFFKEQSSDQFYRWKFAEDCTSLMKTRLS
LGKFLPDLSWLVVTSVMKNIVFHIRTVQNKMVYQIVTDDEEGSSSSLTAMNIKVEDGVSL
SKVVHFNPADIIIVEDSSQVLELKQETDFYQEEDEVVELRRSKRRNVIPDRYYGCDYEPD
TNAGWVRTMPYRYGTKWALVSMEESEEDEEGGCDEDGDNTDDDLYVPLSHLIKRKRSNPR
EVRPGSRQGEIVLVEKNRGGRFGKKQRKTDLSIIPFTPVSEPIPLEQFGLNANCLGGSGG
SSRSHYFDEIDKYRSKPVKYGKKRTEMEEMMESDLCWNGPNHVKTVQKRISRSSSSSLRS
GAQKTEDSEQPRVYKKVTLSAGAYNKLIDTYMNNIDSTIAAKDESTNVVDQWEELKKTNF
AAKPHGEMEETSSEDDDDDDDDEGETSENQVLWREMELSLASTYILDDNEARVDNEAFQK
AKGGCVHDYLLNEEIGLCCRLCGHVGTEIRYVSAPFAEHKKWTTETRQIEEDDLKTKMSH
NKEAESQDFTMSSDSSEILAAEESDNVWALIPQLKRKLHTHQQRAFEFLWRNLAGSVEPP
LMDPTSDNVGGCVISHSPGAGKTFLMIAFLTSYLKLFPGKRPLILAPKTTLYTWYKEFIK
WEIPFPVHLIHGRRTYCVFKQNSTVQFKGVPKPSQDVMHVLDCLEKIQKWHAHPSVLVMG
YTSFLTLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRVL
LSGTLFQNNFCEYFNTLCLARPKFVHEVLMELDQKFKANQGVNKAPHRLENRARKFFLDN
IAKKIDAGVGEERLQGLNMLKNMTNSFIDNYEGSGSGTSDALPGLQIYTLLMNSTDIQHN
ILTKLQNVMETYHGFPLELELLVTLAAIHPWLVKTSTCCAKFFNPQELVEIEKLKHDAKK
GSKVMFVLNMVFRVVKREKILIFCHNIAPIRLFIELFENVFRWQRGKEILTLTGDLELFE
RGRVIDKFEDPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPG
QQKIVYVYQLLSRGTLEEDKYKRTTWKEWVSSMIFSEEFVEDPSLWQAEKIEDDVLREIV
GEDRVKSFHMIMKNEKASTG
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaacgcttctatgatttgaagcatccatttgatccatgccctttcgagatc
tttagctcgggtacatggaaggctgtggaatatctaaggatcgaagatggaaagatgaca
atacgtttggtagagaacgtttatgtgttggaagatatccgtccattccaaaggcttcgt
ctcagatcaagaaaagccactttgagcgactgtacttgtttcctccggcctggtatcgat
gtttgtgttctctatcctctctatgaagatgacccggaaccggtttgggtcgacgcaagg
attgcttctatagagaggaagcctcatgactctgaatgctcttgcaagatctatgtcaga
atctatatagaccaaggctgcattggttcggagagacaaagaatcaacagagactctgtg
ctcatcggtctaaaccaaatctctattcttcaaaggtttttcaaggaacagagttctgac
cagttctacagatggaagttcgccgaggactgtacatcactgatgaaaacgagactgtcg
ttgggaaagttcttgccggatctttcgtggctggtcgttacgtcggttatgaaaaacatt
gtgtttcacataagaacagtgcagaacaagatggtttatcagattgtaacagatgatgaa
gaaggctctagcagctctttgactgcgatgaatatcaaagtggaagacggtgtttcgtta
tcaaaagtggttcatttcaatccagcggatattataatagtcgaggattcttctcaagtt
cttgaattaaagcaagaaaccgatttctaccaggaagaagatgaggtagtggaactgcgt
cggtccaagagaagaaacgtgataccggatagatattacggatgtgattatgaaccggat
accaatgccggttgggtgcggacgatgccgtaccggtatggtactaaatgggctctcgtt
agtatggaggagagtgaggaagacgaagaaggtggttgcgatgaggatggtgataatact
gatgatgatttgtatgtacctttatcgcatttgatcaagaggaaaagaagtaatcctcga
gaagtgaggccgggaagtagacaaggagagattgttctggtggagaaaaacagaggaggt
aggtttggtaaaaaacagaggaaaacagatctttcgattattcctttcactccggtgtct
gagcctataccgttggaacagtttggtcttaacgctaactgtttgggcgggagtggcggt
tcctcaagaagccattactttgatgagattgacaagtatcgaagtaagcccgtgaaatac
gggaagaagaggacggaaatggaagagatgatggaatctgatctatgttggaatggtcct
aaccacgtgaagacagttcaaaaaagaatatcccgatcatcatcatcatcattgcggtcc
ggtgctcagaaaacagaggattcagagcagccacgggtttataagaaagtaacattgagc
gcaggtgcatataacaagctgatagatacgtacatgaacaatattgattcaacaattgca
gccaaggacgagtctaccaatgttgttgaccagtgggaggagttaaagaagacgaacttc
gcagctaaaccgcacggggagatggaagaaacctcgagtgaggatgatgatgatgatgat
gatgatgagggagagacttcagagaaccaagtgttatggagagaaatggaactctctttg
gcttctacttacattctagacgacaacgaggcaagagtggacaacgaggctttccaaaaa
gcaaaaggtggctgtgtacatgattatttactgaacgaagaaatcgggctatgttgtagg
ttatgtggtcatgtaggaactgagataagatatgtttcagcaccttttgcggaacataag
aaatggactacagagactaggcaaatcgaagaagatgacttgaagactaaaatgagccac
aacaaagaagctgaaagccaagatttcactatgtcaagtgattcttcggagatacttgca
gctgaagaaagcgacaacgtttgggcattaatacctcagcttaagagaaaactacataca
catcaacaacgagctttcgagtttctctggagaaatctagcaggatctgtggaaccaccg
ctaatggatcccacttcagataacgtaggaggttgtgtgatctctcattctcctggagct
ggtaaaactttcctaatgattgctttcctcacaagctacttgaagctattccccgggaaa
agacctttgattcttgctccaaagacaactctctatacttggtacaaggagttcatcaaa
tgggagatcccgtttccggttcatttgatccatggacgaagaacctactgtgtattcaag
cagaacagcacggttcagttcaagggagttccaaaaccgagccaagatgttatgcatgtt
cttgactgcttagagaaaatacagaaatggcacgcgcatcctagcgttcttgtaatgggt
tacacctcgtttctgactttgatgagggaagactcgaagtttgctcaccggaagtacatg
gctaaagttctaagagagagtcctggtcttcttgttcttgatgaaggacataacccgagg
agtaccaaatcgagattacgcaaggccctgatgaaagttggtaccgatttaagagtactt
ctctcgggtactttgttccagaacaatttctgcgagtacttcaacacgctgtgtttagct
agacccaagtttgttcatgaggttctaatggagttagatcagaaattcaaggccaaccaa
ggcgtgaataaggcgcctcacaggctcgagaacagagctcgtaaattctttctcgacaat
attgccaaaaagattgatgcgggtgtaggagaagaacgacttcagggtctcaatatgttg
aagaatatgactaatagtttcattgataactatgaaggaagtggaagtggaactagcgat
gctcttcccggtttacagatctatacgttgctgatgaactcaacggatatacagcataac
atactcacaaaacttcagaacgtaatggagacttatcatggctttccactcgagcttgag
cttctggtcaccttggcagctatacatccttggttggtcaagacctcaacctgttgcgca
aagttcttcaacccgcaagaacttgtggagatcgaaaagctcaagcacgacgccaaaaaa
ggatctaaagtcatgtttgtgctaaacatggtgttccgagtggtcaaaagggagaaaatc
ttgatcttctgtcacaacattgcgccaatccgtctgtttatcgagctgtttgagaacgtt
tttagatggcagagaggcaaagagattttgaccttaaccggagatctcgagctgttcgag
agaggcagagtgatagacaagtttgaagatccaggaaacccatccagagtcttgctagcc
tcgatcacagcttgtgcagaagggattagtctaacagcggcttcacgagtcatcatgctc
gactcggaatggaacccttcaaagacaaagcaagcaatagctcgtgcgttcagaccggga
cagcagaagattgtttatgtttatcagctcttgtctagaggaacattggaggaagacaag
tacaagaggacgacttggaaagaatgggtttcgagtatgatattcagtgaggagtttgtt
gaagatccgtctctatggcaagctgagaagattgaagacgatgttcttagagagatcgtg
ggggaagatagagttaaatccttccatatgatcatgaagaatgagaaagcttcaacaggg
tga
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integrated database retrieval system
