Eutrema salsugineum (saltwater cress): EUTSA_v10012508mg
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Entry
EUTSA_v10012508mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K08518
syntaxin-binding protein 5
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10012508mg
Membrane trafficking [BR:
eus04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
EUTSA_v10012508mg
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
EUTSA_v10012508mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Synaptobrevin
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
18018372
NCBI-ProteinID:
XP_006399016
UniProt:
V4L9W6
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MFARKFLQKSSGAQKPPLAPPPRGCLITEDLDPHIITHYGIPSTASLLAFDPIQCLLAVG
TLDGRIKVIGGDNIEAILASPKQLPFKNLEFIENQGFLVSISNENEIQVWDLDLRQTASS
LHWESNITAFSILHGTGYMYVGDEYGMVSVLKYSADEGKLVQLPYYVPTDALAEAAGLSS
PIDYPVVGLLSQPCSRGTRLLIAFSNGLLFLWDASEDRVVLVRGNKDLPVEGKTVDDSLE
ASHDELSDLELDGKEISSLCWASADGSVLAVGYVDGDILFWEFSDGQKGKPSNHAVKLQL
SSAEKRLPVIVMHWCVDVSRKNCGGKLFIYGGDIIGSEEVLTMLALDWSSGMRGLKCVGR
VDLTLSGSFADMVLSPIASSRQSGMFLFLLTNPGQLQAYDDTSLASLMAQKENNISVSPL
PYPMVVPTMDPHMTVAMFAALNVNDKTSLALSEIVLAAKARTPRTPSGESAQWPLTGGIP
SHLDDYKLERLYMAGYQNGSVRIWDATYPCLSLLYDLKPKVNGIDITGVDASVTAISFCS
KTSCLAVGNEFGMVRLFKLAGHKSGGALEVVTNTDKQVHRLDQEDGPQWLAAYSFLSSPV
CTLRFVQSTRRLAVGFKCGRVAMLDTGAPSVMFITNSLSDSGSPIKLLCVKSSSAPTGSI
SGPTDQNSINSEARDESILCAMTQDGQTILFDGNTGKILSSCLRPLKNPTAICMHIIEDC
YENSEIPSEKPAENPSGKEKQENISHLINASESHSPGGEQNAVTETKLVDQRFANSLFLM
CSEDALRLYSLKSLSQGSLESIMEVNLPRPCCWMGTLKKDERECAVLLLYRTGHIEIRSF
PDLEVVGESSLLSLLRWNFKPNMEKTVCSDDFGHVVLVNGCEVSILSFLAHANGFRIPES
LPLLHDKVLAAAADATFSHFPAHKKNHDGAPKFLSGIIKGFRSSNEQKVDQVQDFSHLGN
IFSNPPYLKPSATGGNDDEKIVELNIDDIEIDEPLNILPLTEKVKKEKKDKRTDKERLFD
GASSDAQPKTRTVDEIKAKYRNAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAEN
FASMAHELAKQMEKRKWWNI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccagaaaattcctgcagaaatcctcgggtgctcagaagcctcctttagctcct
ccgcctcggggatgtttgataacagaagacttggatccccatattatcacccactatggg
ataccttcgacagcatctcttcttgcctttgaccctattcaatgcctcttggctgtggga
acactagatggaaggataaaagtgattggtggtgataacatcgaggcgattcttgcatct
cctaagcagctacctttcaaaaacttagagttcattgaaaaccaaggctttctggtcagc
atctcaaatgaaaacgagattcaggtttgggacttggatcttaggcagacagcgtcaagc
ttacactgggagtcaaatattactgcattttcaatcctccatggcaccggttacatgtat
gtcggtgatgagtatggtatggtgtctgttctaaagtacagtgctgacgaagggaaacta
gtgcagcttccttattacgtaccaactgatgctttagctgaagcagcggggctttcatct
cctattgactatccggttgttggacttctttctcagccttgttcaaggggaactagactg
ttgattgcattttcaaatggattactttttctttgggacgcatcagaagatcgtgtcgtg
ttagttcgagggaacaaagatctacctgtggagggtaagactgtcgatgattctctggaa
gcctcacacgatgagctttctgatcttgaactagatggaaaagagataagttctttgtgt
tgggcatcagctgatggttcagttcttgctgttggttatgtggatggcgatatattattt
tgggaattttctgatgggcaaaaagggaagccatctaatcacgctgtaaagttacagttg
tcttcggctgagaaaagacttcctgtcattgttatgcattggtgtgtggatgtatctcgc
aagaattgtggtggaaaactctttatctatggtggtgatatcattggttctgaagaagta
ctgacgatgttggctcttgattggtcttctggtatgagaggtctgaaatgtgttggccgt
gttgacctgacccttagtggttcatttgctgatatggtcttgtctccaattgctagctca
aggcaaagtgggatgtttttatttctgttgacaaatccaggacaactgcaagcatatgac
gatacctctctggcttctctgatggctcagaaagagaataatatttctgtttctccgctg
ccatatccgatggttgtaccgactatggatccacatatgacagtagcaatgtttgctgcg
ttaaatgtgaacgataagacgtcactggctctttctgagatagtcttagccgcaaaagct
cgaaccccacgtactccatctggagaaagtgcgcaatggcctctaacaggtggtattcca
agccaccttgatgactacaagcttgaaagactgtacatggcaggatatcaaaatggttct
gttcgaatatgggatgcaacctatccatgtctgtctcttctttatgacttgaagccaaag
gtaaatggtattgacataactggagtagatgcatcagtaacagcaatttccttctgctct
aagacatcttgtttggctgttggtaacgaatttggtatggttcgcctatttaagctggcc
ggccataaaagtggaggagctttggaagttgttactaacactgacaagcaagttcaccgt
ttggatcaagaggatggacctcaatggttggctgcgtattccttcctgagttccccagtt
tgcaccctgcgatttgtacagtctacaagaaggcttgctgtgggatttaaatgtggcagg
gttgcaatgctcgacactggtgcgccatcagtaatgttcattacaaatagcttatctgac
tccggttccccaatcaagttactttgtgtgaaatcctcttcagctccaactggctcaata
agtggtccaactgatcagaactccataaattccgaagctcgtgatgaatcaatcttgtgt
gcaatgacccaggatggacagaccattcttttcgatggcaatactggaaaaatactctcc
tcatgcttgagacctctgaagaacccaactgcgatttgtatgcacattatagaggactgc
tatgaaaactctgaaatccccagtgaaaaacctgctgaaaatccatctgggaaggagaaa
caggagaacatatctcatctgatcaatgcaagtgagagtcattcaccaggtggtgaacag
aatgctgtcacggaaacaaaacttgttgatcaaagatttgcgaattcattatttctcatg
tgttctgaggatgcgctgcgcttgtattctttaaagtctttatctcagggaagtcttgag
agcattatggaagtaaatcttccacgtccgtgttgctggatgggaacccttaaaaaggat
gaaagggagtgtgcagtactcctgctttaccgaacagggcatattgaaataagatctttc
ccagatcttgaagttgtgggagagagctctttgctgtcacttcttaggtggaactttaag
cctaatatggagaagacagtatgttcggatgatttcggccatgtcgtcctggtaaatggt
tgtgaagtttccatcctttcgtttctggcccatgcaaacggattcaggattccggagtct
ttacctttgcttcatgacaaagtccttgcagccgctgctgatgctacctttagccatttc
cctgcccataagaaaaaccatgatggcgctccgaaattcctaagtggcattattaaaggc
ttcagatcaagcaatgaacagaaggtggaccaagtacaagatttctcccaccttgggaac
atcttttctaatccaccatacttaaagccttctgctaccggtggcaacgatgatgagaag
attgtcgagctaaacatagatgatatcgagatagatgaacctctaaacatcttgcctcta
accgagaaagtaaagaaagaaaagaaagataagagaacagataaggaaagactgttcgac
ggtgcatccagtgatgcacagcccaaaacaagaacagtggatgaaatcaaggccaaatac
agaaacgcaggggaaacctcagcaatagcttcacaagcaaaggacaaacttcttgagcgt
ggagaaaaactcgagagaatcagtcaacgcacagctgagcttcaagacggggcagagaac
tttgcatcgatggcacatgaacttgctaagcaaatggagaagcgaaaatggtggaacatt
tga
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