Eutrema salsugineum (saltwater cress): EUTSA_v10012551mg
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Entry
EUTSA_v10012551mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14409
protein SMG7
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10012551mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10012551mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
EUTSA_v10012551mg
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10012551mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
18019441
NCBI-ProteinID:
XP_006400499
UniProt:
V4LQ18
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MMASQMDKNTASSPRERAQSIFDKTVELEIKRRKAAQARNPSDPNLWQQIRENYEAIILE
DHAFSEKHGIEVTLWQLHYKRIEDFRSHINAVLASNSSSVAQNAKGPSRPEKGPERVAKL
KLQFRTFLSEATGFYHDLILKIRSKYGLPLGYFSEDQESQNLADKDGKKLAEVKKGLVSC
HRCLIYLGDLARYKGLYGEGDSKNREYAAASSYYLQAASLLPASGNPHHQLAIIASYSGD
EFAATYRYFRSLAVESPFPTARDNLIVAFEKNRQIYAQLFAASKDSSRRVTGKGRGKGGD
VSSKEANLVAGPEKDKVTSANEILKAFCIRFVRLNGILFTRTSLETFFDVLASTSSSLRE
LISSSLMEEPSFGIDTSDSALFIVRLVTILIFSVHNSKKETEGQSYAEIVQRVEPARNSV
TASFELLGHVIEQCAQLGDPSSSYFLPGVLVFVEWLACCPDIALGSDPDDRQTAVRNSFW
NQCVTFFNKILSLGPLFIDDVEDETCFSNMSLYDERETENRLALWEDYEIRGFLPLLPAQ
TILDFSRKHSFRTEGPKEKKARIKRILAAGKALTSVIKIDQNHVHFDSKKKKFIVGVKPS
DDLLDSHSSPPEVDYALQDDQAMINHNLPVMQRDQQIYLGEEDDDDEVIVFKPLVAEKSK
GASEQTYVPNGGFRNPDQVATIGDLQALSGSDAAFHENLYLQARGNASVQVPACVGSNLL
GLLQPSTQSQAMHLQQLQTPAGHPQPAQSIASARLQPMQSQVAQLQPLQSRVVHFQQTQA
QASHVSPGQLQSASLGGSLSGFAQMANGLVMRNETHGNHGVSYFPAHSLPTHQSFNVNGM
GGMPYSQSRTPEAVLPPQIDAVSSSGVIADGLGVQSSLARKNPISRPSRHLGPPPGFNSV
PSKLLKEPAPVSDLPGNNLLVDDYSWLDGYQARSSRGTGLNNSLNYASSRKPEHMGTSTS
NGLNGPANFPFPGKQVPTSQVRPEFPYFQNPQKDNFVNENHQAGQLPEQYQGQSSWPSRH
FV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcacagatggataaaaatactgctagctcgccaagagagcgagcccagtcc
atattcgacaagactgttgagttagaaatcaagcgtcggaaggctgctcaggctcgaaat
ccgtctgacccaaatctgtggcagcaaattcgtgagaattatgaagcaataattcttgaa
gatcatgccttttctgagaagcacggcattgaagttactctgtggcagttgcattacaaa
cggattgaagactttagatcgcacatcaatgctgttttggcttctaatagctcaagtgtg
gcgcagaatgcaaaaggtccctctagacccgagaaaggacccgaacgagttgcaaaactc
aagctccagttcagaacattcctttccgaagcaactgggttttaccatgatctgatctta
aaaattagatcaaagtatggtcttcccttgggttatttttcggaggatcaagagagtcaa
aatttggctgataaggatggaaagaagttagcagaagttaaaaaaggcttggtatcttgt
caccgttgtttaatataccttggtgatttggctcggtataaaggattgtatggagaagga
gattccaagaaccgtgagtatgctgctgcttcaagttactatttgcaagcagcttctcta
ttgccagccagtggaaaccctcatcatcagcttgctataattgcttcttattccggagat
gagtttgcagcaacatatcgctatttccggagtttggctgtggagagtccttttccaact
gcccgtgacaacttgattgttgcttttgaaaagaatcgtcagatttatgcccaattgttt
gcggcttccaaagactcatctaggagggtgactggtaaaggaagaggtaaaggcggagat
gtttcatcgaaagaagcgaacttggtagctggtcctgagaaggataaagtaactagtgca
aatgagattctcaaagcattctgcattagatttgttcgtctcaacgggattcttttcacc
cgaacaagcctggagacattctttgatgttcttgcctcgactagcagcagtttacgagag
ctgatttcttcgagcttaatggaagagccgagttttggtatagacaccagtgacagcgca
cttttcattgttagacttgtgacaattcttatatttagcgtccataactcaaagaaagag
acagaaggtcagtcatatgcagaaattgtacagcgtgtggagcctgccagaaactccgta
acagcaagttttgaattacttggacacgttatagagcagtgtgcgcaactgggtgatcct
tcgtcgagttacttcttgcctggtgtgttagtttttgttgaatggttggcctgttgtcct
gatattgcactcgggagtgatccggatgatagacagactgctgtaagaaatagtttttgg
aaccagtgtgttactttcttcaataagatcttgtcgcttgggccgttgtttattgatgat
gtcgaagatgagacttgcttctcaaacatgagcttgtatgatgaaagagaaactgaaaac
cggcttgcactgtgggaagactatgaaataagaggattcttgccactgcttccagctcag
actattctcgacttctcaagaaaacattcctttcgaaccgaaggtcccaaggaaaagaaa
gctcgtataaagaggatcctagcagcagggaaagctttgaccagtgtgatcaaaattgat
cagaatcatgtgcattttgattcaaagaagaagaagttcattgttggtgtaaaaccgtca
gatgacttgctggattctcattcaagcccaccagaagttgattatgctttacaagatgac
caagcaatgatcaatcataatttgcctgtgatgcaacgagatcaacaaatttatttgggt
gaggaggatgatgatgatgaagtaattgttttcaagcctctagttgctgagaagagcaaa
ggggcttctgaacaaacatatgttcctaatggaggcttcaggaatcctgatcaagttgct
actatcggggacttgcaggctttgagtggttcagatgcagcttttcatgaaaatctctat
ctacaagcaagaggcaacgcaagtgttcaagttcctgcatgtgttggttctaaccttctg
ggacttcttcagccgtcaacccagtctcaggctatgcatttgcaacagcttcagacacca
gcagggcaccctcagccagcccaatcaatagcttctgcacgacttcagccaatgcaatca
caggtcgcacaacttcaaccactgcaatcacgggttgtgcactttcaacaaactcaagca
caggcttcacatgtttcaccgggccaattacaatctgcttcccttggaggtagcctatct
ggttttgctcagatggctaatggtcttgtcatgaggaatgagacgcatggaaatcatgga
gtttcctatttccctgcacactcattgccaacccaccagtctttcaatgtcaatggtatg
ggtggcatgccatattctcagtcacgaacacctgaagctgttttgccaccccaaattgat
gctgtttcgtcttctggagttattgctgatggcctgggcgtccaatcttcattagcacga
aaaaatccaatcagtagaccctctaggcatcttggccctccgcctgggtttaactccgtc
ccctctaagctgctgaaggagccagcacctgtttcggatctgcctggcaacaacctactg
gttgatgattacagctggttggatggatatcaagctcgatcgtctcgaggcactggactc
aacaattctttgaattacgcttcttctaggaaaccagaacacatgggtaccagtaccagc
aatggactgaacgggcctgccaactttccgttccctggaaaacaagttccaacatcacag
gtcagaccagaatttccgtattttcagaatcctcagaaagataactttgtgaacgaaaac
catcaagctggtcaactccccgagcaataccaaggacagtccagttggccgagtcgccac
tttgtgtga
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integrated database retrieval system