KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10012551mg
Entry
EUTSA_v10012551mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14409  protein SMG7
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EUTSA_v10012551mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10012551mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     EUTSA_v10012551mg
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     EUTSA_v10012551mg
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 18019441
NCBI-ProteinID: XP_006400499
UniProt: V4LQ18
LinkDB
Position
Unknown
AA seq 1022 aa
MMASQMDKNTASSPRERAQSIFDKTVELEIKRRKAAQARNPSDPNLWQQIRENYEAIILE
DHAFSEKHGIEVTLWQLHYKRIEDFRSHINAVLASNSSSVAQNAKGPSRPEKGPERVAKL
KLQFRTFLSEATGFYHDLILKIRSKYGLPLGYFSEDQESQNLADKDGKKLAEVKKGLVSC
HRCLIYLGDLARYKGLYGEGDSKNREYAAASSYYLQAASLLPASGNPHHQLAIIASYSGD
EFAATYRYFRSLAVESPFPTARDNLIVAFEKNRQIYAQLFAASKDSSRRVTGKGRGKGGD
VSSKEANLVAGPEKDKVTSANEILKAFCIRFVRLNGILFTRTSLETFFDVLASTSSSLRE
LISSSLMEEPSFGIDTSDSALFIVRLVTILIFSVHNSKKETEGQSYAEIVQRVEPARNSV
TASFELLGHVIEQCAQLGDPSSSYFLPGVLVFVEWLACCPDIALGSDPDDRQTAVRNSFW
NQCVTFFNKILSLGPLFIDDVEDETCFSNMSLYDERETENRLALWEDYEIRGFLPLLPAQ
TILDFSRKHSFRTEGPKEKKARIKRILAAGKALTSVIKIDQNHVHFDSKKKKFIVGVKPS
DDLLDSHSSPPEVDYALQDDQAMINHNLPVMQRDQQIYLGEEDDDDEVIVFKPLVAEKSK
GASEQTYVPNGGFRNPDQVATIGDLQALSGSDAAFHENLYLQARGNASVQVPACVGSNLL
GLLQPSTQSQAMHLQQLQTPAGHPQPAQSIASARLQPMQSQVAQLQPLQSRVVHFQQTQA
QASHVSPGQLQSASLGGSLSGFAQMANGLVMRNETHGNHGVSYFPAHSLPTHQSFNVNGM
GGMPYSQSRTPEAVLPPQIDAVSSSGVIADGLGVQSSLARKNPISRPSRHLGPPPGFNSV
PSKLLKEPAPVSDLPGNNLLVDDYSWLDGYQARSSRGTGLNNSLNYASSRKPEHMGTSTS
NGLNGPANFPFPGKQVPTSQVRPEFPYFQNPQKDNFVNENHQAGQLPEQYQGQSSWPSRH
FV
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgatggcttcacagatggataaaaatactgctagctcgccaagagagcgagcccagtcc
atattcgacaagactgttgagttagaaatcaagcgtcggaaggctgctcaggctcgaaat
ccgtctgacccaaatctgtggcagcaaattcgtgagaattatgaagcaataattcttgaa
gatcatgccttttctgagaagcacggcattgaagttactctgtggcagttgcattacaaa
cggattgaagactttagatcgcacatcaatgctgttttggcttctaatagctcaagtgtg
gcgcagaatgcaaaaggtccctctagacccgagaaaggacccgaacgagttgcaaaactc
aagctccagttcagaacattcctttccgaagcaactgggttttaccatgatctgatctta
aaaattagatcaaagtatggtcttcccttgggttatttttcggaggatcaagagagtcaa
aatttggctgataaggatggaaagaagttagcagaagttaaaaaaggcttggtatcttgt
caccgttgtttaatataccttggtgatttggctcggtataaaggattgtatggagaagga
gattccaagaaccgtgagtatgctgctgcttcaagttactatttgcaagcagcttctcta
ttgccagccagtggaaaccctcatcatcagcttgctataattgcttcttattccggagat
gagtttgcagcaacatatcgctatttccggagtttggctgtggagagtccttttccaact
gcccgtgacaacttgattgttgcttttgaaaagaatcgtcagatttatgcccaattgttt
gcggcttccaaagactcatctaggagggtgactggtaaaggaagaggtaaaggcggagat
gtttcatcgaaagaagcgaacttggtagctggtcctgagaaggataaagtaactagtgca
aatgagattctcaaagcattctgcattagatttgttcgtctcaacgggattcttttcacc
cgaacaagcctggagacattctttgatgttcttgcctcgactagcagcagtttacgagag
ctgatttcttcgagcttaatggaagagccgagttttggtatagacaccagtgacagcgca
cttttcattgttagacttgtgacaattcttatatttagcgtccataactcaaagaaagag
acagaaggtcagtcatatgcagaaattgtacagcgtgtggagcctgccagaaactccgta
acagcaagttttgaattacttggacacgttatagagcagtgtgcgcaactgggtgatcct
tcgtcgagttacttcttgcctggtgtgttagtttttgttgaatggttggcctgttgtcct
gatattgcactcgggagtgatccggatgatagacagactgctgtaagaaatagtttttgg
aaccagtgtgttactttcttcaataagatcttgtcgcttgggccgttgtttattgatgat
gtcgaagatgagacttgcttctcaaacatgagcttgtatgatgaaagagaaactgaaaac
cggcttgcactgtgggaagactatgaaataagaggattcttgccactgcttccagctcag
actattctcgacttctcaagaaaacattcctttcgaaccgaaggtcccaaggaaaagaaa
gctcgtataaagaggatcctagcagcagggaaagctttgaccagtgtgatcaaaattgat
cagaatcatgtgcattttgattcaaagaagaagaagttcattgttggtgtaaaaccgtca
gatgacttgctggattctcattcaagcccaccagaagttgattatgctttacaagatgac
caagcaatgatcaatcataatttgcctgtgatgcaacgagatcaacaaatttatttgggt
gaggaggatgatgatgatgaagtaattgttttcaagcctctagttgctgagaagagcaaa
ggggcttctgaacaaacatatgttcctaatggaggcttcaggaatcctgatcaagttgct
actatcggggacttgcaggctttgagtggttcagatgcagcttttcatgaaaatctctat
ctacaagcaagaggcaacgcaagtgttcaagttcctgcatgtgttggttctaaccttctg
ggacttcttcagccgtcaacccagtctcaggctatgcatttgcaacagcttcagacacca
gcagggcaccctcagccagcccaatcaatagcttctgcacgacttcagccaatgcaatca
caggtcgcacaacttcaaccactgcaatcacgggttgtgcactttcaacaaactcaagca
caggcttcacatgtttcaccgggccaattacaatctgcttcccttggaggtagcctatct
ggttttgctcagatggctaatggtcttgtcatgaggaatgagacgcatggaaatcatgga
gtttcctatttccctgcacactcattgccaacccaccagtctttcaatgtcaatggtatg
ggtggcatgccatattctcagtcacgaacacctgaagctgttttgccaccccaaattgat
gctgtttcgtcttctggagttattgctgatggcctgggcgtccaatcttcattagcacga
aaaaatccaatcagtagaccctctaggcatcttggccctccgcctgggtttaactccgtc
ccctctaagctgctgaaggagccagcacctgtttcggatctgcctggcaacaacctactg
gttgatgattacagctggttggatggatatcaagctcgatcgtctcgaggcactggactc
aacaattctttgaattacgcttcttctaggaaaccagaacacatgggtaccagtaccagc
aatggactgaacgggcctgccaactttccgttccctggaaaacaagttccaacatcacag
gtcagaccagaatttccgtattttcagaatcctcagaaagataactttgtgaacgaaaac
catcaagctggtcaactccccgagcaataccaaggacagtccagttggccgagtcgccac
tttgtgtga

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