Eutrema salsugineum (saltwater cress): EUTSA_v10012587mg
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Entry
EUTSA_v10012587mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03410
Base excision repair
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10012587mg
03410 Base excision repair
EUTSA_v10012587mg
03420 Nucleotide excision repair
EUTSA_v10012587mg
03430 Mismatch repair
EUTSA_v10012587mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10012587mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10012587mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EUTSA_v10012587mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EUTSA_v10012587mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
AAA_22
AAA_30
AAA_19
RCF1-5-like_lid
BRCT_2
Rad17
AAA_assoc_2
nSTAND3
AAA_18
Zeta_toxin
Gp44_lid
RuvB_N
AAA_17
AAA_5
AAA_14
AAA_28
Sigma54_activ_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
18019298
NCBI-ProteinID:
XP_006400706
UniProt:
V4LEN0
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGSAPNRLLSKAVAVTSAAETASIKSEQASEDQESAARRKTSKYF
GKDKTIAKDEKEVGEIPAKRKLKTDSDDLGKSRPRKAIKVDDDDDDFEVPNSRKTRDSTP
SKKLKSGSGRGVTSKAVDIDEDDDGEDAQEKETPLKSGGRGRGGRAASGASTGGRGRGGG
RGGFMNFGERKDPPHKGEKEVPEGNPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVT
GSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSLPERTNKGTE
KVSAQLKISPQKEETRGKLVAKISPNKVPPHSSPAKAKKKIIQTSLPWTEKYRPKVPNEI
VGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGAKKAVLMSGTPGIGKTTSAKLVS
QMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAIAANIDRSKHPKTVLIM
DEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRKPTKQQM
AKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIRQRLLSS
AKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLVQENYLNYRPSSTGKDEA
KRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSILPASLLHGSREVLEQGERN
FNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETIRVDYLPLLLNRLTSPLQTL
PKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPLEGVPPAVKSALTKKYNETNKT
RMVRAADMVQLPGMKKAPKKRIAAMLEPSVESLKDEDGELLAENEEENESDAEDSEEATD
GEKLESNLKNLNARGIQVEVDVKGAGSSGLRKAAGKGRGRGKAADASEKKAAGRGSGAKR
KR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattcggaaatggtttatgaaagcccatgaaaagggaaatggtagtgctcca
aatcgacttctttccaaggcagttgctgtgactagtgctgcagagactgcatccataaaa
tcagagcaggctagtgaagaccaggaaagtgctgctagaagaaaaacgagcaagtatttt
ggtaaagataaaacaatagctaaagatgagaaagaggtgggagaaattcctgccaagagg
aaacttaagacagattctgatgatttaggcaagtcccgtccaagaaaggctatcaaggtt
gatgatgacgatgatgattttgaggtacctaattcaaggaagactcgtgatagcactccc
agcaaaaaactaaagtctggatcaggcagaggagtcacaagtaaagccgttgatattgac
gaggatgatgatggtgaagatgcccaagaaaaagagactcctctaaaatcaggtggaaga
ggccgtggcggtagagctgcatcaggggcctcaactggtggaagaggtagaggtggaggg
cgaggtgggtttatgaattttggtgaaaggaaagacccaccgcataaaggagaaaaggaa
gttcctgaaggcaaccctgattgcttagctggattgacatttgtaattagtggaacactt
gatagtttagaaagagaagaagcagaagatctgataaagcgacatggtggtcgtgttaca
ggctctgttagcaagaaaacgacttaccttttgtgcgatgaagacatcggcggaaggaaa
tccgaaaaggctaaagagctgggcactaagttccttacagaggatggcctatttgacatg
atccgttcctctaaacccgttaaaaagtctctacctgaaaggaccaacaaaggcactgaa
aaagtcagtgcacagctgaagataagtcctcagaaggaagagacaagaggcaaacttgta
gcgaaaatttcacccaacaaggttcccccacattcctcaccagcaaaggcaaaaaagaaa
attatccagacttccttgccatggacggaaaaatacagaccgaaggttccaaatgagatt
gttgggaatcagtcattggttactcagcttcacaactggctgtcccattggcatgatcaa
tttgggggtactggaagtaaaggaaaggggaagaaattaaatgatgccggtgccaagaag
gctgtgcttatgagcggaacacctggtattggaaaaacaacatcagcaaagttggttagt
cagatgcttggtttccaggcagttgaggttaatgctagtgacagtcgtggaaaggcaaac
tcgaatatcgccaaaggaattggtggtagcaatgcaaatactgtaaaagaacttgtcaat
aacgaagctattgctgctaacatcgataggtcaaagcacccaaagacggttctaatcatg
gatgaagtagatggaatgtctgcaggcgacaggggaggtgtagcagatcttattgctagc
attaaaatatcaaaaattcctatcatctgcatttgtaatgaccgatacagtcagaaactg
aaaagtttagtaaactactgcctgcccctcaatttccggaagcccacaaaacagcagatg
gcaaaaaggttgacacatattgctaaggcagaaggccttgaagttaatgaaattgccctg
gaggaactcgctgagagagtgaatggtgacatacgtttggccctaaatcagctacaatat
atgagcctgtccatgtcagtcatcaagtacgatgatatcaggcagcgcctgctaagcagt
gcgaaggatgaagatatttcgcctttcacagctgttgacaagttgtttggttataatggt
gggaagctgagaatggatgaacggattgaccttagcatgagtgattttgatttggttccc
cttcttgtacaggaaaactatctcaattataggccaagttccaccggcaaagatgaggca
aaacgaatggagttgcttgctcgtgctgctgaatctattgcagatggagatattatcaac
gtgcagattcggagacataggcaatggcaactctctctatcttcctgtgttgcatcttct
attctcccagcttcattgttgcatggatcaagggaggtgctcgagcagggagaacgtaat
ttcaatagatttggtgggtggcttggcaagaattctactgcaggaaaaaatacaaggttg
ctggaggatctgcatgttcatgtccttgcttcccgtgaatccagctctggaagggagact
attcgtgttgattaccttccccttctcttgaatcgcttgacgagcccacttcagacacta
cctaaggatgaagctgtttcagaagttgttgaattcatgaactcctactctataagccag
gaggactttgatactattatggagttggcaaaatttaagggacgtgcaaatccattggag
ggtgtcccacctgcagttaaatcagctttgactaaaaaatataatgagacgaataaaacc
agaatggtacgtgctgctgacatggttcagcttccgggaatgaaaaaggcgccaaagaag
agaatagctgcaatgcttgaaccaagtgttgaaagtttgaaagatgaagatggtgaactg
ttggcagaaaacgaagaagaaaatgaatcagacgctgaagactcagaagaagcaaccgat
ggagaaaagctggagtcaaatctaaaaaatctgaatgctagagggattcaagttgaagtg
gatgtgaaaggagctggaagttcaggtttaagaaaggcagcgggtaaaggcagaggcaga
ggcaaagcagcagatgcctctgagaagaaagctgcaggacgaggctctggtgccaagaga
aagagatga
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integrated database retrieval system
