KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10012641mg
Entry
EUTSA_v10012641mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12842  U2-associated protein SR140
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10012641mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10012641mg
Spliceosome [BR:eus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    EUTSA_v10012641mg
 Complex B
    EUTSA_v10012641mg
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 SAP CTK3
Other DBs
NCBI-GeneID: 18017789
NCBI-ProteinID: XP_006399577
UniProt: V4KSY4
LinkDB
Position
Unknown
AA seq 883 aa
MLIKKYGPFCEKSRDGGTISKKGSRYVPSFLPPPLASKNKEPENKREEERSKEREKGKTR
NIDHFMEELKREQEMRERRNQDRANPHDHHSDNTSSSRFDELLDDFDPSGRLGSFDDGDP
QTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEEKRRQRHCGFVAFMNRADG
QAAKDEMQGIIVYDNELKIGWGKAVALPSQALPAPPPGHMAIRSKEGCNLIFSGTSGPPI
TSVPNQNSELVLTPNVPDITVVCPEDEHLKHVIDTMALNVLDGGCAFEQAIMERGRGNPL
FNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMITGSGRWIPPQLPATRSPEHGK
ESTGTYAAGRSRRVEADQTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEVI
EVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLY
CSVTGRITAEALKERVLKVLQVWADWFLYSDAYINGLRATFLRSGNSGVTTFHSICGDTP
DIEKKCHMGNMNNADKINQDAALAIGKGAARQELMNLPVSELERRCRHNGLSLVGGREMM
VARLLSLEDAEKQRFYEVEDENAKYPQGHSTWEEVHTEPERMRASYDKVETVEPVNLPLT
IPIPLPELKAFVKNEKNNLILPASRWAREDDETDDEHKMSYSSRSDNAGGITFNIDEEDL
KADPSVRVQPENEIDEVQRQKLRRIEVSLIEYRESLEEQGMRNSEEIERKVTIQRKKLEA
DSLSENQRVLPEKKERREDVRESSRKRYRSESQNRSQSPPQKSSTRERVRDHDLDRERHR
DRGRQQHDLDKDRERREKSSNHERDDHDRSRERDRDWRRRGLR
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgttaataaaaaagtatggacccttttgtgaaaagtccagagatgggggtaccatttca
aagaaggggagtaggtatgttccctcctttctccccccaccattggcatctaagaataaa
gaaccagagaataagagggaagaagagagatcaaaggagagagaaaagggaaagactcga
aacatagatcactttatggaggagctaaagcgtgaacaggaaatgagagaaaggcgaaac
caggatcgtgctaatccccatgaccatcatagcgataacacgtcatctagccgctttgat
gagctacttgatgattttgatcccagtggaaggctagggtcatttgacgatggtgaccca
caaactacgaatctatatgttgggaatctttcacctaaggttgatgaaaattttctcctg
cggacgtttggaaggtttgggcccatagctagtgttaaaattatgtggccaagaacagag
gaggagaaaaggcgacaaagacattgtggctttgttgctttcatgaatagagccgatgga
caagctgccaaagatgaaatgcaagggattattgtgtacgataatgagctgaaaattgga
tggggtaaagcggttgctctgccatcacaagcattaccagctccacctccggggcatatg
gcaatccggagtaaggagggctgcaacttaatcttttcaggtacatcgggtccaccaata
acttctgttccaaatcaaaattctgagctggttcttaccccaaatgttccggatatcact
gtcgtttgtcctgaggatgagcacctcaaacatgttattgatacaatggcccttaatgtg
ctggacggcggatgcgcttttgaacaagctattatggagagggggcgcgggaatccacta
tttaacttcttgtttgagctgggctcgaaggagcatacctactatgtctggaggctctat
tcctttgctcagggtgataccctccaaaggtggagaacagagccgtatatcatgataact
ggaagtggaagatggattcctccacagctgcctgcaactaggagcccagagcatggaaaa
gagtcaacaggcacatatgctgctgggagaagcaggcgcgtggaagctgaccaaactcta
accgatcctcaaagggatgaatttgaggacatgttgcgagctctaacgttagaaaggagt
caaatcaaagaagctatgggttttgctttggataacgcagatgcagctggagaggtcatt
gaagttctgacagaatcgttgaccctgaaagagacaccgattccaacgaaagttgcaaga
ctcatgcttgtgtctgatattcttcataatagcagcgctcctgttaaaaatgcctctgca
tataggacgaaattcgaagcaacattacccgatataatggaaagcttcaatgatctgtac
tgcagtgtaactggaagaattacagctgaggctctgaaagaacgagttcttaaggtactg
caggtatgggcagattggtttctctattcagatgcatatataaatggactacgtgccacg
tttcttcgatcaggaaactcaggtgttaccacgtttcactctatctgtggtgatacgcct
gatatagagaagaaatgtcacatgggtaatatgaacaatgctgataagatcaatcaagac
gctgcacttgcaattggcaaaggagctgcaaggcaagagctgatgaatctaccagtttct
gagcttgagagacgctgcagacacaatggtctgtcacttgtagggggtagagagatgatg
gttgctcggctgctaagcctggaagatgcagagaaacaacgtttctacgaagtagaagat
gaaaatgcaaagtatccacagggacattcaacttgggaagaagttcatactgagcctgag
cggatgagggcaagctatgataaagttgaaactgtagagcctgtgaatctgcccttgaca
ataccaatcccactgccggaactgaaagcatttgtgaaaaacgagaaaaataacctcata
ttgccagcttccagatgggcgagagaggatgatgaaactgatgatgaacataagatgagc
tactcctcacgaagcgacaatgctggtggcataactttcaatatcgatgaagaggatctc
aaggctgatccaagtgttcgtgtccagcctgaaaatgaaatcgacgaggtgcaaagacaa
aagcttagacgcatagaggtttctttgattgagtatcgagaatctctcgaggaacagggg
atgagaaactctgaggagattgaaagaaaagtcacaatccagcgaaagaaacttgaagct
gatagcttatcagaaaatcagagagtattaccagagaaaaaggagaggcgtgaagatgtt
agagaatcatctagaaagagataccgaagtgagagccagaatcgaagtcaaagtccacca
cagaaatcatcaaccagagaaagagtaagagatcatgacttggacagagaaagacacaga
gatagaggtaggcaacaacatgatttggacaaggatcgagaacgaagagaaaaaagctca
aatcatgagagagacgatcatgatagaagcagagagcgagacagagattggcgcagacga
ggcttgagatga

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