Eutrema salsugineum (saltwater cress): EUTSA_v10012651mg
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Entry
EUTSA_v10012651mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10012651mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10012651mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
EUTSA_v10012651mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
18016906
NCBI-ProteinID:
XP_006400201
UniProt:
V4LD89
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MKPRSESKNGRLAAASREAVNKVLDRSRARGSRGKNKRDDSAQNCDSTSTEGDKGEHEKG
KQAFKEKLTDNVLEDRECGKRAGCDDDEMNDSDWEDCPIPSVGNTIDAYIDDTRDLTIEF
DDVPDTKRQKNVYRPTAEDKERAELVHKVHLLCLLARGRIVDNACNDPLIQASLLSLLPS
YLAKVSNLENVTVRDIAPLLRWVRGNFSVRCTPSSEKSFRTSLAFALESRRGTSEELGAL
AVALFRALKLTTRFVSILDVASLKPGADKDESSGQNRAKMKHGIFRSSTLMVPKQQVISS
YPSKSSSHVENKGLCETSESQHGNPLGSNQSQGNTVNSSCEARMSSKSDGTRRKGDVEFE
MQLAMALAATATADNQQSSKVNEEKKSREITKTNKGLSVSDQVISTAIGSKKVDSPLCWA
EVYCSGENMDGKWVHVDAVNGILDAEQTVEAGAAACKSLLRYVVAFAGGGAKDVTRRYCT
KWHTISSKRVSSLWWDMVLAPLRELESATSLIPVANKASSSSSSFGRRSALEDMELATRA
LTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGPVLGFCSGHSVYPRTCVQTLKTKERW
LRDGLQLKANEAPLKILKRNSKLKKVKDFGDGNKDSEDGSWCMELYGKWQMEPLCLPHAV
NGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFSVAKRFGIDYAPAMVGFEYKSGRATPV
FEGIVVCTEFKDTILEAYAEEQEKREEEERRQNEAQAASRWYQLLSSILTRERLKNRYAN
NSKDVETRSLETKSEPVAKGKNVKSPEKQGGVKRGRSRGRKSHEHEHEHENGPEHEHVFL
DEEETFDEETSVKTKRCKCGFSVEVEQM
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctagaagcgaaagtaagaatggtagacttgcagcagcctctagagaagcagtg
aacaaagttctagacagaagcagagctcgtggctctcgaggcaagaacaaacgagatgat
agtgcacagaactgtgattccacttccacagagggggataaaggcgaacatgagaagggg
aagcaagccttcaaggaaaaattaactgataacgttctagaggacagggaatgtggtaaa
agggcaggttgtgatgatgatgaaatgaatgattcagactgggaagactgtccgattcct
agtgttggtaatacgattgatgcgtacattgatgacacccgagacttaaccatagaattt
gacgatgtgcctgatactaagaggcagaagaatgtttaccgcccaacagcagaggacaag
gaacgagcggaacttgtccacaaggttcacttactctgtctgcttgcaagagggaggata
gttgacaacgcttgtaatgatccattgattcaggcttccttgctttcacttctaccatca
tacttggcaaaagtatcaaatctcgagaatgttactgttagggatatagcccctcttctt
cgttgggttcgtggaaacttttctgttaggtgtactcccagctctgagaaatcttttcgt
acttctctagcatttgctcttgaatcacgtagaggcacgtctgaagagcttggagcactg
gccgttgctttgtttagggcattaaagctcacaactcggtttgtgtctattcttgatgtt
gcatccttaaaaccaggggccgataaggatgaatcttcaggtcaaaacagagctaaaatg
aagcatgggatattcaggagctcaactcttatggtgccgaaacagcaagtcatctcgtca
tacccaagtaaatcttcttcccatgttgagaataagggtctctgtgagacctctgagtct
cagcatgggaaccccctgggctctaatcagtcgcaaggtaatacggtcaactcatcttgt
gaagcacgaatgtccagcaaatctgacggaacaaggaggaaaggagatgttgagttcgag
atgcaattagccatggctctggctgcaactgcaactgcagacaaccaacagagctctaaa
gtgaatgaggaaaagaagagtcgagaaataacaaaaacaaataaaggcttgtcagtttct
gaccaagtaatatccacagctatcggttcgaagaaagtggattctcctctttgttgggct
gaggtgtattgcagtggggaaaacatggatgggaaatgggtccatgtggatgctgtcaat
ggaattttagatgcagagcaaactgtagaagctggagctgctgcgtgcaaaagcttactt
agatatgttgtcgccttcgctggtggtggagccaaagatgttactcgcaggtactgtaca
aaatggcacacgatttcatccaaacgggtgagttcactgtggtgggatatggtattagca
ccgttaagagaactagagtcagccacaagcctaatccctgttgccaacaaagcttcctca
agtagctcgtcctttggtagaaggagtgctcttgaagatatggagttagctactcgggca
cttactgagcctcttcccactaaccagcaggcttataaaagtcacgaactctatgctatt
gagaaatggcttcacaagaaccagatacttcacccaaaaggtccggttctgggattttgc
tctggtcattccgtttatcctcgaacctgtgtgcagactcttaaaacaaaagaaagatgg
cttcgtgatgggctacaactgaaggcaaatgaagctcccttaaagattcttaagcgtaac
tcgaagttgaaaaaggtaaaagattttggagatgggaataaggacagtgaagatggttct
tggtgcatggaactatacggaaagtggcaaatggaaccattgtgtctccctcatgctgtt
aatggaattgtgcctaagaacgagcgtggtcaagttgatgtctggtctgagaaatgcctt
ccacctggaacagtccacttaaggtttcctcgaatattttctgtcgctaagagatttgga
atagattatgcacctgcaatggttggtttcgagtacaaaagtggacgtgctactcctgtt
tttgaaggaattgtggtctgtaccgagttcaaagatacaatcctcgaggcatatgcagaa
gaacaagaaaagagagaagaagaggagagaagacaaaatgaagcacaagcagcttcgaga
tggtatcagcttctttcgtctatcttaacccgtgaaagattgaaaaaccgttacgccaat
aactcaaaggatgtcgaaacgaggagtttggaaacgaaatcagagccggtcgctaagggg
aagaatgtgaaatcacctgaaaagcagggaggggtcaagagaggaaggtcacgaggaaga
aagtctcatgaacatgaacatgaacatgaaaatggacctgaacatgaacatgtgtttctt
gatgaggaagaaacctttgatgaggaaacctctgtgaaaaccaaacgctgcaaatgtggc
ttttctgtcgaagttgaacaaatgtag
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