KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10012664mg
Entry
EUTSA_v10012664mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10012664mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10012664mg
Enzymes [BR:eus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EUTSA_v10012664mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    EUTSA_v10012664mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    EUTSA_v10012664mg
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 ResIII zf-RING_5 zf-rbx1 zf-RING_UBOX DEAD zf-ANAPC11 AAA_34 RING_XB3-XBAT31 Prok-RING_4 SWI2_SNF2 zf-Nse DEAD_2
Other DBs
NCBI-GeneID: 18018076
NCBI-ProteinID: XP_006398972
UniProt: V4KR55
LinkDB
Position
Unknown
AA seq 861 aa
MSQFLPHLSSSPMASEEEFRPSEEPSQQSQEYISEPHMVGFVIANIVGLKYYSGRINGRE
LVGLVREPLNPYDENAIRVLNMRSVQVGHIERPVAAVLSPLIDSRMIVVEGIVPNTRSST
NRFKIPCQIHIFAKLEESSAVKSTISRAGLVLISDSDTSFGLSEAVVVKEQMGNGENKSL
DKIFKLVDKNVRQKEKMAEVEPPREVIKSELFAHQKEGLGWLLQREKSGELPPFWEEKDG
EFLNVLTNYRTDKRPEPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSSPAEEPLDVE
GEKIEKKGKKRGRGKSSESGTRKKLKSDDVVCMNVSRKTTLIVCPPSVFSAWITQLEEHT
VPGSLKVYMYHGGERTDDVNELMKYDVVLTTYSTLAVEESREHSPVKKMEWLRIILDEAH
TIKNANAQQSRAVCNLKASRRWAVTGTPIQNGSLDLYSLMAFLRFEPFSIKSYWQSLIQR
PLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEA
KGVVQNLISNGSLMRNYSTVLSIILRLRQLCDDSSLCPPELRSFSASTSIEDVTDKPELL
QKLVAILQDGEDFDCPICLSPPRDIVITRCAHIFCRACILQTLQRTKPCCPLCRGSLTQS
DLYNAPPPPPDTFNTDEGDTKSSTKSSKVSALLSLLLASRQENPNTKSVVFSQFRKMLLL
LEIPLKAAGFTILRLDGAMTVKKRTQVIGDFGNPELTGPVVLLASLKASGAGINLTAASR
VYLFEPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQYKKKNLANEAFK
RRRGKDQREVNVEDVIALMSL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtctcagtttcttccacacttgtcttcttctcccatggctagcgaagaagagtttcgt
ccttccgaggagccgtcgcagcaatctcaggagtatatttcagagcctcacatggtggga
ttcgtcatcgcgaacatagtagggttaaagtactactcaggcagaatcaacggccgagaa
ttggtgggtctggtccgagagcccttgaacccgtacgacgagaacgcaatcagagtactc
aacatgcgatccgtccaagtaggtcacatcgagcgacccgtagccgccgttctctcgccg
ttgatagactctcgcatgatcgtcgtcgaaggtatcgtacccaatactcgttctagcacc
aataggttcaaaatcccctgtcaaatccacatatttgcgaaattagaagagtcctctgct
gtgaagtcgacgatttcgcgagctgggttggtgttgatttcggattccgatacatcgttt
gggttatcagaggctgttgtagttaaggaacagatgggtaatggagagaataagagttta
gacaagattttcaaactagttgataagaatgtgaggcaaaaggagaaaatggctgaggtt
gagccgccgagggaagtgataaagtcggaactatttgctcatcagaaggaaggattgggc
tggttactccaaagggagaaatctggagaattgcctccgttttgggaggagaaagatgga
gaattcctaaacgttttgacgaattaccgcacggataagcggcctgaacctttgcgtgga
ggggtgtttgctgatgatatgggattgggtaagacccttactttgctttctctgatagct
tttgatagatatggcaatgcatccaccagttcgccagccgaagaaccattggatgtggaa
ggagaaaagattgaaaagaagggtaaaaagagaggaagaggcaagagcagtgaaagtgga
actcgaaagaagcttaaatctgatgatgttgtttgcatgaatgtgtctcgaaagacaacg
ttgattgtttgtccaccttctgtgttttcagcatggattacacagctagaggagcatact
gtaccgggaagcttgaaggtgtatatgtatcatggtggcgaaaggacagacgatgttaat
gagcttatgaagtatgatgtagtgctgactacttacagcactctggctgttgaggaatcg
agggaacattctcctgtcaagaagatggaatggctgagaataattctggatgaagcacac
accattaagaatgcaaatgcacaacagagtcgagcggtttgtaatttgaaggcttcccgc
agatgggctgtcacaggaactcctattcagaatggatcacttgatttgtactctttgatg
gcgtttctccggtttgagccgttttcgattaagagttattggcaaagcttgatacaacgc
ccgcttggtcaagggaataagaaggggctttcacgtttacaggttttaatggcgacgata
tcgttgaggagaacaaaagaaaagagtttgattggtttgccacccaagactgttgaaact
tgttatgttgaactttcaccggaagagcgtcagttatatgatcacatggaaggagaagcc
aaaggtgtagtgcagaatcttataagtaatggaagcttgatgcgcaattactcaacagtt
ctgagtataatcttacggcttagacagctttgtgacgacagttctctatgccccccagaa
ttaagatctttctccgcttctacatctattgaagatgtgactgataagccagagctgctg
caaaagctggttgcaatattacaagatggcgaagattttgactgtccaatttgcctttcg
ccaccaagagacatcgtcatcactcgatgtgctcacatcttttgcagggcgtgtattctc
caaacccttcaaagaactaaaccttgttgccctctttgccgtggctctctaacccaatcc
gatctctacaatgctcctcctcctcctccggatactttcaatactgatgaaggagacacc
aaatcttcaaccaaatcctcaaaggtctcggctttactatcgcttctcttggcatcaaga
caagaaaaccccaacacaaagtccgtggtgttctctcagttcaggaaaatgctgcttcta
ctagaaatcccgctgaaagccgcgggtttcaccatcttacgcttggatggggcaatgact
gtgaagaaacggacccaagtcattggagattttgggaatccggagttaacggggcctgtg
gtgttgcttgcgagcctcaaggcttctggtgctggcataaatctaactgcagcgtcaagg
gtgtacttgttcgagccgtggtggaaccctgcagttgaagaacaggccatggacaggatt
cataggattgggcagaaacaagaggttaaaatgattaggatgattgcgagaaacagtatc
gaagagagggtccttgagctccagtacaagaagaagaatcttgcgaacgaagcttttaaa
agaaggcgtgggaaagatcaaagagaggttaacgttgaagacgtgattgctctcatgtct
ctctga

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