KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10012714mg
Entry
EUTSA_v10012714mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EUTSA_v10012714mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10012714mg
   03009 Ribosome biogenesis [BR:eus03009]
    EUTSA_v10012714mg
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10012714mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:eus04147]
    EUTSA_v10012714mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     EUTSA_v10012714mg
Ribosome biogenesis [BR:eus03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    EUTSA_v10012714mg
Membrane trafficking [BR:eus04131]
 SNARE
  SNARE associated proteins
   Others
    EUTSA_v10012714mg
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    EUTSA_v10012714mg
Exosome [BR:eus04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   EUTSA_v10012714mg
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N CDC48_2 AAA_16 AAA_2 AAA_5 AAA_33 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 nSTAND3 AAA_28 Mg_chelatase ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 ABC_tran Viral_helicase1 Vps4_C AAA_7 NACHT NB-ARC TsaE AAA_24 DUF815 AAA_lid_PRS2_C Zeta_toxin Zot Molydop_binding
Other DBs
NCBI-GeneID: 18016943
NCBI-ProteinID: XP_006398779
UniProt: V4LCV7
LinkDB
Position
Unknown
AA seq 810 aa
MSNQPESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSIHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADESCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETEPAEYCVV
APDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGNSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLNIF
KACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP
EAMEEDLVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFDP
TAAAGRTTGGAAADPFATSAAAADDDDLYS
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtcaaaccaacctgaatcttccgactcgaaatcgaagaaggatttcagtactgctatt
cttgagaggaagaagtctccaaaccgacttgttgtagacgaagccatcaacgatgacaac
tctgtcgtctctatccatcctgccaccatggaaaagctccagcttttccgtggcgatacg
attctcatcaagggtaagaaaaggaaggacacagtctgcattgctcttgctgatgagtca
tgtgaggaacctaagatcagaatgaacaaggtcgtaaggtccaacttgagggttagactt
ggagatgttgtttctgttcaccaatgcccagacgtcaagtatggtaagcgtgtgcacatc
ttgccagttgatgataccgttgaaggagttactggaaacctcttcgatgcttacttgaaa
ccttacttcctggaggcgtaccgcccagtgaggaagggtgatctattcctagtgagagga
ggaatgaggagtgtggagttcaaagtaatcgagactgagcctgcagagtactgtgtggtc
gctccagatacagagattttctgtgagggtgaaccaataaagagggaggacgaagaaagg
ctggatgaagtcggttatgatgatgttggtggcgtcaggaaacagatggctcagattagg
gaacttgttgaacttcctttgaggcatccgcaactgttcaagtcaattggtgtaaagcca
ccaaagggtattctgctttatggacctcctgggtccggaaagactctgattgctcgcgcc
gtggccaacgaaaccggagcttttttcttctgtattaatggaccggagatcatgtcgaaa
ctggctggtgagagcgagagcaacctcaggaaagcatttgaggaggctgagaagaatgct
ccttctatcatatttattgatgaaatcgactctattgcaccaaaaagagagaagactaat
ggagaggttgagagaaggattgtctctcagctccttacgcttatggatggactgaaatcg
cgtgcccatgttattgtcatgggagcaacaaatcgccccaacagtatcgacccggctttg
agaaggtttggaagattcgacagggaaattgatatcggtgttcctgatgaaatcggacgt
cttgaagttcttaggatccacacgaagaacatgaagctatctgaagatgtggatctagaa
agaatctccaaggacacacatggatatgttggtgctgatcttgcagctctatgcactgaa
gctgcccttcaatgtatcagagagaagatggatgtgattgacttggaagatgactctatt
gacgccgaaatcctcaattccatggctgtgtctaatgaacatttccagaccgctcttgga
aacagcaacccatctgcacttcgtgaaaccgttgtggaggttccaaatgtctcctgggag
gatattggaggtcttgagaatgttaagagagagctacaggagactgttcaataccctgtg
gagcatccagagaaattcgagaaatttgggatgtctccatcaaagggagttcttttctac
ggtcctcctggatgtggaaaaacccttctagccaaagcgatagcaaacgagtgccaagca
aacttcatcagcgtcaagggacctgagcttctcactatgtggtttggagaaagtgaggcc
aacgtccgagaaatctttgataaggctcgtcagtctgctccttgcgttctgttctttgat
gagctcgactccattgctactcagagaggaagcagcgtgggtgatgcaggcggtgcagct
gatagagttttgaatcagcttttgacagaaatggatggaatgaatgcgaagaagacggtc
ttcattattggagcaactaacagacctgacattattgatccagctcttcttcgacctgga
agactcgaccagcttatctacattcctctacccgatgaggattcccgtctcaacatcttc
aaggcgtgcttgaggaaatctcctgttgctaaagatgtcgatgtgactgcactcgccaag
tacactcagggattcagtggtgctgatatcactgagatttgccagagagcttgcaagtac
gccatcagagagaatatcgaaaaggatatcgagagggagcgtagaaggagcgagaatcca
gaggccatggaggaagatttggtggacgatgaagttgcagagattagagctgctcatttc
gaagagtcgatgaagtatgcaaggaggagtgtgagtgatgctgatattcgcaagtaccaa
gcttttgctcagacgctgcagcagtcgagaggatttggaactgagttcagatttgaccca
accgccgctgctggacgcaccactggtggtgctgccgccgatccctttgccacttctgca
gctgctgccgatgacgacgatctttacagttag

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