Eutrema salsugineum (saltwater cress): EUTSA_v10012714mg
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Entry
EUTSA_v10012714mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v10012714mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10012714mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10012714mg
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10012714mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10012714mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EUTSA_v10012714mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EUTSA_v10012714mg
Membrane trafficking [BR:
eus04131
]
SNARE
SNARE associated proteins
Others
EUTSA_v10012714mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EUTSA_v10012714mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EUTSA_v10012714mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
Vps4_C
AAA_7
NACHT
NB-ARC
TsaE
AAA_24
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
18016943
NCBI-ProteinID:
XP_006398779
UniProt:
V4LCV7
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MSNQPESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSIHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADESCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETEPAEYCVV
APDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGNSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLNIF
KACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENP
EAMEEDLVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFDP
TAAAGRTTGGAAADPFATSAAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaacctgaatcttccgactcgaaatcgaagaaggatttcagtactgctatt
cttgagaggaagaagtctccaaaccgacttgttgtagacgaagccatcaacgatgacaac
tctgtcgtctctatccatcctgccaccatggaaaagctccagcttttccgtggcgatacg
attctcatcaagggtaagaaaaggaaggacacagtctgcattgctcttgctgatgagtca
tgtgaggaacctaagatcagaatgaacaaggtcgtaaggtccaacttgagggttagactt
ggagatgttgtttctgttcaccaatgcccagacgtcaagtatggtaagcgtgtgcacatc
ttgccagttgatgataccgttgaaggagttactggaaacctcttcgatgcttacttgaaa
ccttacttcctggaggcgtaccgcccagtgaggaagggtgatctattcctagtgagagga
ggaatgaggagtgtggagttcaaagtaatcgagactgagcctgcagagtactgtgtggtc
gctccagatacagagattttctgtgagggtgaaccaataaagagggaggacgaagaaagg
ctggatgaagtcggttatgatgatgttggtggcgtcaggaaacagatggctcagattagg
gaacttgttgaacttcctttgaggcatccgcaactgttcaagtcaattggtgtaaagcca
ccaaagggtattctgctttatggacctcctgggtccggaaagactctgattgctcgcgcc
gtggccaacgaaaccggagcttttttcttctgtattaatggaccggagatcatgtcgaaa
ctggctggtgagagcgagagcaacctcaggaaagcatttgaggaggctgagaagaatgct
ccttctatcatatttattgatgaaatcgactctattgcaccaaaaagagagaagactaat
ggagaggttgagagaaggattgtctctcagctccttacgcttatggatggactgaaatcg
cgtgcccatgttattgtcatgggagcaacaaatcgccccaacagtatcgacccggctttg
agaaggtttggaagattcgacagggaaattgatatcggtgttcctgatgaaatcggacgt
cttgaagttcttaggatccacacgaagaacatgaagctatctgaagatgtggatctagaa
agaatctccaaggacacacatggatatgttggtgctgatcttgcagctctatgcactgaa
gctgcccttcaatgtatcagagagaagatggatgtgattgacttggaagatgactctatt
gacgccgaaatcctcaattccatggctgtgtctaatgaacatttccagaccgctcttgga
aacagcaacccatctgcacttcgtgaaaccgttgtggaggttccaaatgtctcctgggag
gatattggaggtcttgagaatgttaagagagagctacaggagactgttcaataccctgtg
gagcatccagagaaattcgagaaatttgggatgtctccatcaaagggagttcttttctac
ggtcctcctggatgtggaaaaacccttctagccaaagcgatagcaaacgagtgccaagca
aacttcatcagcgtcaagggacctgagcttctcactatgtggtttggagaaagtgaggcc
aacgtccgagaaatctttgataaggctcgtcagtctgctccttgcgttctgttctttgat
gagctcgactccattgctactcagagaggaagcagcgtgggtgatgcaggcggtgcagct
gatagagttttgaatcagcttttgacagaaatggatggaatgaatgcgaagaagacggtc
ttcattattggagcaactaacagacctgacattattgatccagctcttcttcgacctgga
agactcgaccagcttatctacattcctctacccgatgaggattcccgtctcaacatcttc
aaggcgtgcttgaggaaatctcctgttgctaaagatgtcgatgtgactgcactcgccaag
tacactcagggattcagtggtgctgatatcactgagatttgccagagagcttgcaagtac
gccatcagagagaatatcgaaaaggatatcgagagggagcgtagaaggagcgagaatcca
gaggccatggaggaagatttggtggacgatgaagttgcagagattagagctgctcatttc
gaagagtcgatgaagtatgcaaggaggagtgtgagtgatgctgatattcgcaagtaccaa
gcttttgctcagacgctgcagcagtcgagaggatttggaactgagttcagatttgaccca
accgccgctgctggacgcaccactggtggtgctgccgccgatccctttgccacttctgca
gctgctgccgatgacgacgatctttacagttag
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