Eutrema salsugineum (saltwater cress): EUTSA_v10012906mg
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Entry
EUTSA_v10012906mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10012906mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10012906mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EUTSA_v10012906mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
PHD
LolA
Zn_ribbon_RanBP
C1_2
Motif
Other DBs
NCBI-GeneID:
18017463
NCBI-ProteinID:
XP_006399560
UniProt:
V4LMH2
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MPRKGFSNFDDYDDGFDDEDDYDYDYDIDIDEQEAAEPKEEVAQQGLWRCAICTYDNDES
MFVCDICGVLRHPSAGNQTINNNTAPFKFDSPSPDDVVSNGLTSSRTGPQVSTRQKEKQD
SAEQNSVKKRGDSSETSSRGRHDNAENSFSKGSAGGIKSGKSLPKAKADMSTETSSSSKN
VEVSESLTGTMNKMSLTEETKKSNDIKTRIPISKSKHKPEEWMLLDEESDTLSQLNLAIV
GHVDSGKSTLSGRLLHLLGRISQKQMHKFEKEAKLQGKGSFAYAWALDESAEERERGITM
TVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASIGAFEAGFDNLKGQ
TREHARVLRGFGVEQVIVAVNKMDIVGYSKDRFDLIKQHVGSFLHSCRFKDSSLTWIPLS
AMENQNLVAAPSESRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPICDVVRSTSQGQVS
ACGKLEAGAVRPGSKIMVMPSGDQGTVRSLERDSEACSIARAGDNVAIVLQGIDANQVMA
GGVLCHPDYPVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKT
GEATKKSPRCLTAKQSAMLEVSLQYPVCVEIFSESRALGRVFLRSSGRTVAMGKVTRIIH
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaaggattctccaatttcgatgattatgatgatggttttgatgatgaagat
gattatgattatgactatgatatagatatagatgaacaagaagctgctgaaccaaaggaa
gaagttgctcagcaagggctttggcgatgtgcaatctgtacttatgacaatgatgagagt
atgtttgtgtgtgatatttgcggcgttcttcgtcatccttcggctggaaatcaaactatc
aataacaatacagcacctttcaagtttgattctccatccccagatgatgtagtttccaat
ggactaacttcctcgagaactggtccacaagttagcacgaggcagaaagagaagcaagat
agcgcagaacagaattctgtaaagaaaagaggagatagttcagaaacaagctctcgaggt
agacatgataacgctgaaaatagtttttcaaagggcagtgctggtggcataaaatctggc
aaaagtttgccaaaagcaaaagcagatatgtctactgagacaagttcttcgtccaaaaat
gtggaggtgtcggagagtcttactggtactatgaacaagatgtctttgactgaggaaaca
aaaaagtccaacgatattaaaactagaataccaatatcaaaatctaagcataagccagag
gagtggatgcttcttgatgaagaatcagatacactaagtcaacttaatcttgccatcgtg
ggacatgttgattccggtaagtcaacactttcgggtagattactgcatctattgggaaga
atatctcaaaagcaaatgcacaagtttgagaaagaagcaaagttgcagggcaaagggtcc
tttgcatatgcctgggcattggatgagagtgctgaagagagggaacgaggaataacaatg
actgttgctgttgcttatttcaattccaaaagacatcatgttgttttgctcgactctcct
gggcacaaagattttgttccaaacatgatcgcaggagcaacacaagcagatgctgcaatt
ctggtcatagatgcatctattggtgcttttgaagctggttttgataatttgaaaggccag
acaagggagcatgctcgggttcttagaggttttggcgtggagcaagtcatagttgcagtc
aacaaaatggatattgttgggtattcgaaggacagatttgatttgattaagcagcatgtt
ggatcttttttgcattcctgtcgttttaaagattcgtctctgacatggattccattaagt
gccatggaaaaccaaaacttggtggcagctccctctgaaagccgcctatcctcatggtat
cagggtccatgtttattggatgccgttgattctgtcaagtctcctgatagagacgtctca
aagcctctactcatgcctatatgtgacgttgtaagatcgacttcacaagggcaggtatct
gcatgtggcaaacttgaagctggagctgttcggccaggatcaaagataatggttatgcca
tcgggagatcaaggaaccgtacggtctctggagcgtgactctgaggcttgctccattgca
agagctggagataacgtagcaatagttttgcaagggatcgatgcaaatcaagtaatggca
ggaggtgttttgtgccatcccgattacccggtttcagtagcgactcatttggaattgatg
gtgctcgtcttggaaggcgcaacaccgatcttgcttggttctcagctggagtttcatgtg
caccatgcaaaggaagcagcaacggttgtgaaacttgtggcaatgcttgatcccaaaaca
ggggaggcaacaaagaagtctcctcgctgtctaactgctaaacagagtgcaatgcttgag
gtgagtcttcaatatccagtttgtgtggagatattttctgaaagtagagctcttggaaga
gtgttccttagatcatcaggaagaacagtcgcgatgggcaaagttacacggattatccac
gactga
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integrated database retrieval system
