Eutrema salsugineum (saltwater cress): EUTSA_v10013014mg
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Entry
EUTSA_v10013014mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10013014mg
03420 Nucleotide excision repair
EUTSA_v10013014mg
03430 Mismatch repair
EUTSA_v10013014mg
03440 Homologous recombination
EUTSA_v10013014mg
03460 Fanconi anemia pathway
EUTSA_v10013014mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10013014mg
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10013014mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10013014mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EUTSA_v10013014mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EUTSA_v10013014mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EUTSA_v10013014mg
MMR (mismatch excision repair)
EUTSA_v10013014mg
DSBR (double strand breaks repair)
HR (homologous recombination)
EUTSA_v10013014mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
18017002
NCBI-ProteinID:
XP_006399289
UniProt:
V4LEA2
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MENSVTQNGIATVLSNQSTDSSSVRPEIVVQVVDLKPVGNRYTFNANDGKMKIKAMLPAT
FRSDIISGKIQNLGLIRLLDYTANDIPGKSEEKYLLVTKCEAVAPPLDAEIKAEIKASTG
IMLKSKQEFVAKSASQIINEQRANAAPAARMAITRRVHPLVSLNPYQGSWTIKVRVTNKA
VMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDTFQMGKVYYISRGSLKLAN
KQFKTVQNDYEMTLNENSEVEEARSEEMFIPETKFNFVPIDELGAYVNQKELIDVIGVVQ
SVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGLGQELLDMADNYPIIAI
KSLKVGDFQGVSLSTVSRSNVVINPDSPEAAKLKSWYDSEGKETSMSTIGSGISSSANNG
SRSMYSDRVCLSHFTSNPSLGEEKPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMD
SGYWCEGCQKKDEECSLRYIMAVKASDSTGEAWCFAFNDEAEKIIGCTADELNKLKSSEE
GEANEFQTKLKEATWSSHLFRVSVSKQEYNSEKRQRITVKGVSPIDFAAETRLLLQDISK
NKTSQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcagtgacccaaaatggtattgcgacggtattgtcgaatcaatccactgat
tcgtcctcggttcgacctgagatcgtcgttcaagtcgtggatcttaaacctgttggaaat
cgatatacgtttaatgctaatgacggaaagatgaagattaaagcaatgctacctgcgact
tttagatctgatataatctctggaaagatccagaatctgggtctgattcgtctccttgat
tataccgccaacgatattccaggcaaatcagaagaaaaatatttgcttgtaacaaaatgc
gaggctgttgctcctccacttgacgctgagattaaggcggagattaaagcatccaccggc
ataatgttgaaatcgaagcaggagtttgttgcgaaatcagcttcacagataatcaatgag
cagagggcaaatgctgcgccagctgcaagaatggctataaccaggagggttcatccgctt
gtttccttaaatccttaccaaggaagctggaccattaaagtccgcgtcacgaacaaagca
gtcatgagaacttacaaaaatgctagaggagaaggatgcgtctttaatgtagaactaact
gatgaggaaggaacacagattcaggcaacgatgtttaacgcagctgcaaggaagttttat
gacacattccagatgggaaaggtctattatatatcgaggggatcacttaagcttgccaat
aagcagttcaagacggttcagaatgattatgagatgactctcaatgaaaattcagaggtt
gaagaagctaggagcgaagaaatgtttatccctgaaacaaaattcaactttgtacctatt
gatgagttgggtgcatacgtgaatcagaaggagcttattgatgttattggcgttgtccaa
agtgtttctccgacgatgagcattaggaggaagaatgacaatgagatgatcccaaagagg
gatatcactttagctgatgagacgaagaaaactgttgtggtgtccctctggaacgaccta
gcaactggcttagggcaagaactgctagatatggctgataactatcctattatcgcaatt
aagtctctcaaagttggagattttcaaggtgtgtcattgtccactgtcagcaggagtaat
gtggtgataaatcctgattctccagaagctgcaaagttgaaatcttggtatgattctgaa
ggtaaagagacatctatgtctactattggctctggtattagctcttctgccaataatgga
tcaagatccatgtactcggacagagtctgtctttctcacttcacaagcaatccgtcttta
ggcgaggaaaagcctgtatttttcagtactagagcttacataagcttcatcaagccagac
cagacaatgtggtaccgtgcgtgcaagacctgtaacaagaaagtgactgaagcaatggac
tctggttattggtgtgaaggttgtcagaaaaaggatgaagagtgcagtttaaggtatata
atggcggtgaaagcctctgattcaaccggtgaagcctggtgttttgcattcaacgacgaa
gcagaaaagattattggatgtacagctgatgaactcaataaactaaaatcatcagaggaa
ggtgaagcgaatgagtttcagacaaaactgaaagaagctacttggtcatctcatctcttc
cgcgttagtgtttctaaacaagagtataacagcgagaagagacagcggataactgtaaaa
ggtgtttctccgattgattttgctgctgaaacaagattattgctccaagacatttccaag
aacaagacatctcagtaa
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integrated database retrieval system
