Eutrema salsugineum (saltwater cress): EUTSA_v10013124mg
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Entry
EUTSA_v10013124mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10013124mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
EUTSA_v10013124mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
EUTSA_v10013124mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
18018954
NCBI-ProteinID:
XP_006402140
UniProt:
V4LUN9
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MATAIVMNGEPKKQPRPGRGGFQARGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK
TAACRKYGLARAPKLVEMIAALPDNERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
DKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET
RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP
EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
TREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTC
PELMGKCSVVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIARREHRSNKIGVIS
GVGTRHYYRKLGYELEGPYMVKHLL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgatagtgatgaacggcgagccgaaaaagcaacctcggccaggtcgcggc
ggtttccaggcccgtggattgactgaggaagaagctcgagttcgcgccatatcggagatt
gtcagcacaatgattgagcgctcccaccgcaacgagaatgttgacctaaatgcaattaaa
accgccgcttgccggaaatacggcctagcgcgtgcgccaaagcttgtagagatgatcgct
gcgcttcctgataacgagagagagactcttctcccgaagctccgtgctaaaccggtccga
acagcttcagggatcgccgtcgtggcggttatgtcgaagcctcacaggtgccctcacata
gccacgacggggaatatctgcgtgtattgtcccggtggacctgactctgacttcgagtat
agtactcagtcttacactggatacgagcctaccagcatgcgagctattcgagccaggtat
aatccatatgttcaggcaaggagcaggatagatcagctgaagcggttgggtcacagtgta
gataaggttgagttcattttgatgggaggtacttttatgtcgctgcctgctgagtatcgg
gattattttatacggaacctgcatgatgcgttgtcaggacacacttccgccaacgttgag
gaagcagttgcttattctgaacatagtgcaactaaatgcattggcatgacaattgaaacg
aggccagattactgtcttggacctcatctgcgacaaatgctgatttatggttgcacccga
ctagagatcggtgtccagagtacatatgaagatgttgcccgtgacacaaatagaggccat
actgttgctgcggtagcagactgcttctgcttggctaaagatgctggtttcaaggtggtt
gcacatatgatgcctgatctccctaatgttggggttgagagagacatggaaagtttcaag
gagtttttcgagagcccgtcatttagagcagatgggttaaagatatatcctaccctcgtg
atacgtggaactggcctttacgaactatggaaaactgggaggtaccgaaattatccacct
gagcagcttgttgatatcgttgcaaggattctatccatggtacctccatggacacgtgtt
tatagagtgcagcgtgatattcctatgcctttggttacgtcaggggttgaaaaaggaaat
cttcgtgaactggctctagccagaatggatgacttgggcctcaaatgccgtgatgtccgt
actcgtgaagctggaattcaggacattcatcacaaaattaagccagaacaagtagagctt
gtgcgtcgagattacactgcaaatgaaggttgggagacattcctttcttatgaagataca
cgccaggacattcttgttggcttattacgtttgcgaaaatgcggaaagaacgtaacttgt
ccagaacttatgggaaagtgttctgttgtccgtgagcttcatgtatacggaacggctgta
ccagtgcatggtcgagaggctgataagttgcaacatcagggatacggaacacttctgatg
gaagaagcagagaggattgctagaagagaacaccgatctaacaaaatcggtgtgatctca
ggtgtaggaacccgacattattacagaaagttgggttatgaattggaaggtccttacatg
gtgaagcatcttctttga
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