KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10013126mg
Entry
EUTSA_v10013126mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10140  DNA damage-binding protein 2
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03420  Nucleotide excision repair
eus04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EUTSA_v10013126mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10013126mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10013126mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10013126mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EUTSA_v10013126mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      EUTSA_v10013126mg
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st EIF3I WD_LRWD1 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 18018579
NCBI-ProteinID: XP_006401045
UniProt: V4LRN3
LinkDB
Position
Unknown
AA seq 565 aa
MGLTRNRRKTDPEIVIARDTDSELSSEEEEEEEEEENYPLSELEEEDEAVKNGGRIELEK
NKAKGKAPITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVV
TDHGILPTSHRNTKNPIDFVFKRQLQSRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFH
PTRNNILLSGDKKGQIGVWDFAKVYEKSVYGNIHSVQVNNMRFSPTNDDMVYSASSDGTI
GYTDLETGTSSTLLNLNPDGWQGPSSWKMLYGMDINSEKGVVLAGDNFGFLHMIDHRSNN
GMGEPILIHKLRNKHGSKVVGLDCNPVQPELLLSCGNDHFARIWDMRKLQPGASLNDLAH
KRVVNSAYFSPSSGTKILTTSQDNRIRIWDSIFGNLDLPSREIVHSHDFNRHLTPFKAEW
DPKDTSESLIVVGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRD
DVLASGSSRSLFIWRPQEKTEMVEEKKDKKIMICYGDSKKKGKKQKRCSDDEDDDDDDMF
SSKGKSIKINKSQAKTTKSTRKTKT
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgggtttaacgaggaacagaagaaaaacggacccagaaatcgtcattgctagagataca
gattccgagttaagttcggaggaagaggaagaagaagaagaagaagaaaattaccctttg
tcggagttggaggaagaagacgaagcggtcaaaaatggagggagaattgaattggagaag
aataaagcgaaagggaaagcacccattaccgttaagcttaagaaagtttgcaaagtctgt
aaacagcctggtcatgaagctggatttaaaggagcaacatatatcgattgtcctatgaaa
ccttgcttcttatgcaaaatgcctggccacaccacaatgtcatgcccccatagagtggtt
actgaccacggaatactcccaacttctcataggaatacaaagaaccctatagactttgtg
ttcaagcgtcaactccaatcgagaattccaccgattaaaccaccatatgtgatcccggat
caagtgcattgtgcagttattcgttaccacagtagacgtgttacgtgtttggagttccat
ccaacaaggaacaacattcttctctctggagataagaaagggcaaattggagtctgggat
tttgctaaagtgtatgagaagagtgtgtacggaaacatacactctgtacaagtgaataac
atgcggtttagtcccacaaatgatgacatggtttattctgcatcctctgatggaacgatt
ggttatactgacctggaaactggaacttcatcaactttgctgaatctcaaccccgatgga
tggcagggcccgagtagttggaaaatgttgtacggtatggatataaactcggagaaaggt
gtagtgcttgctggtgataattttgggtttcttcacatgattgaccaccgttctaataac
ggaatgggtgagccaattctgatacacaagcttagaaacaagcacggaagcaaagttgtt
ggccttgactgcaaccctgttcagcctgagcttcttctcagttgtgggaacgatcatttt
gcacgaatctgggatatgcgtaaactacaacctggagcttctcttaatgatcttgcacac
aaacgagtagtcaactctgcttatttctctccatcatcaggtacaaaaatcctcacgacg
tctcaggacaaccgtattcgaatatgggactctatctttgggaacttggatttgccaagc
cgagagattgttcatagccatgatttcaataggcatttgacgccattcaaagctgaatgg
gatcctaaggatacctcggagtcactcattgttgttggtcgttacattagtgaaaactac
aacggagctgctcttcacccaatagatttcattgattcaagcaatggacaactggttgca
gaggttatggatccaaacatcacaactattactccagtcaacaagttgcatccgcgggat
gatgttttagcttctggaagttcaaggtcgctgttcatctggcggccacaggagaaaaca
gagatggttgaggagaagaaggataagaagattatgatatgttatggtgacagtaagaag
aaaggaaagaaacaaaagcgttgcagcgatgatgaagatgacgatgacgacgacatgttt
agctcgaaaggcaaaagcattaaaatcaacaagtctcaagcaaaaacaaccaagtctact
cggaagacaaaaacttaa

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