Eutrema salsugineum (saltwater cress): EUTSA_v10013213mg
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Entry
EUTSA_v10013213mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10013213mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10013213mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10013213mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EUTSA_v10013213mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EUTSA_v10013213mg
PBAF complex
EUTSA_v10013213mg
GBAF(ncBAF) complex
EUTSA_v10013213mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
18017180
NCBI-ProteinID:
XP_006399928
UniProt:
V4N6X4
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MSSNNNNPQKPQGSAPSPFGNPGMASASVPGNQGFAQSQMAANFQAQFQYSQAQAMAHAQ
QQSKVQAQLQAQIQAGMTMNHTQGSQGIGGLGPSSPSMTTPSSLNVKRFQQKPPMRPPSG
FPATNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFESRVDAAL
SRKKVDIQEALKNPPCIQKTLRIFVFNTFANQNNTIPGNPNADPPTWTLKIIGRILEDGV
DPDQPGFVQKSNPLHPKFSSFFKRVTISLDQRLYPENALIIWENSRSPSPQEGFEIKRKG
NQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSF
FNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAISACYDVLVDV
PFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALI
ESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNEGPGNW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaacaacaacaatccacagaagcctcaaggttctgcaccttcacctttcggg
aatcctgggatggcctctgcatcggttcctggaaaccagggttttgctcagtctcaaatg
gcagctaactttcaagctcagtttcagtactcacaagctcaggccatggcccatgctcaa
caacagtctaaagttcaagcacaattgcaagctcagatacaagcaggcatgacgatgaac
catacccaaggttcccaggggattggtgggttgggtccatcttcgccttctatgacaact
ccttcaagtttaaacgtcaagaggttccagcagaaaccgccaatgcgtcctccttctggc
ttccctgcgactaacaacactatctcccccatgagaacaatggagttaactcctgctgca
cggaaaaagaaacagaagctccctgaaaagtcgttgcaggagcgggtggcagcgatcttg
cctgagtctgctttatacacccaacttcttgagtttgagtctcgggtggatgctgcgtta
agtagaaagaaagttgacatccaagaagcccttaaaaaccctccttgcatacagaagacg
cttaggatcttcgttttcaacacgtttgctaaccagaacaacacgattcctgggaatccg
aatgctgacccaccaacatggactctgaaaatcattggtaggatcctggaagatggcgtg
gatcccgaccagccaggatttgttcagaaatcaaacccattgcatcccaaattctcgtct
ttcttcaaaagggtaacaatttccctggatcagaggctgtaccctgagaacgcattgatc
atatgggagaattctcgatcaccttctcctcaggaagggtttgagataaagaggaaaggg
aatcaggagtttgctgctagtatacggttggagatgaactacgtgcctgaaaagttcaag
ctttctactgcactgatggatgttctcgggattgaagttgaaacccggccaagaatcatc
gctgcaatttggcattacgttaaggcgaggaaactgcagaacccaaatgacccttctttc
ttcaactgtgacgctgcacttcagaaagtttttggggaagagaagttgaaattcacaatg
gtctctcagaagatatctcatcacttgtcacctccacctccgattcacttggaacacaaa
atcaagctctcaggcaataatccggccatatcagcatgttacgatgtgttagtggacgta
cccttcccgatccaaagggacctgaacaacttgctggccaacgcagagaagaacaaagag
attgaggcttgtgatgaagcgatatgtgcagccataaggaaaatccatgagcataggagg
agacgtgcatttttcttgggattcagccaatcgccagttgaattcataaacgcattgatc
gaatctcagagcaaggatctgaaggtcgtagcgggagaagccagtcgaaatgctgagaga
gaacgtcgatcagacttcttcaaccaaccttgggtcgaagatgcagtaatacgttacttg
aaccggaggccagcagctgggaacgaggggccagggaattggtga
DBGET
integrated database retrieval system
