Eutrema salsugineum (saltwater cress): EUTSA_v10013219mg
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Entry
EUTSA_v10013219mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eus03016
]
EUTSA_v10013219mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EUTSA_v10013219mg
Transfer RNA biogenesis [BR:
eus03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EUTSA_v10013219mg
Prokaryotic type
EUTSA_v10013219mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18017222
NCBI-ProteinID:
XP_006399958
UniProt:
V4N700
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MAKSLHFTRLMSSSARMAMTSHFFFSVKPRNIHKPYFSSSLFLSTTSTPYPLQYDMIINR
PTQSSLSQTRRRPARAIKSGSPDPEEPDFDSWVDNKLSLEREKGRPGSGDPEMDKAKRKY
YSKRRKRLYGSDSEDESRKSDDGFVELKPEVVEFDRLHQREEELYFYDTFAYPWEKDKHY
KMVYQLEKKYFPEQCLDKAFLQPGETSKADDSGKVRGKKKIALGGKKNEVKRIIGTENCD
EDDDADEKLVFFDEAKEKQKKPEEDVIVKKVEQFFKGVTKSANEKAVASGGDGEPFLVTR
NGELPPRWDGPNGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCI
GKATKVVDRYQGMIKGYSGVFRLGEATSTLDADSPVIQREPWEHIKDDDIKKAFTSFLGE
IWQVPPMFSAIKVGGEKMYDKARRGETVELSPRRISIFQFDIERSLDDRQNLVFRVVCSK
GTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAISKNYF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtctctacacttcacaagactaatgtcttcttcagcaagaatggctatgact
tctcacttcttcttctcagtcaaaccgagaaacatccataaaccctacttctcttcttct
cttttcctttccaccacatctacgccgtacccacttcaatacgacatgatcatcaatcgc
cctacacagtcttctctctcccagacccgtcgtcgacccgcccgagccatcaaatccggt
tcgcctgacccagaagagccggacttcgattcgtgggtcgataataaactgtctttggag
cgtgaaaagggtcgacccggttctggagatccggaaatggacaaggctaagaggaaatac
tacagtaagaggaggaagaggctatacgggtccgattctgaggacgagagccgaaaatca
gatgatggattcgtggaattgaaacctgaagtcgtggaatttgataggttgcatcagaga
gaggaggagttgtatttctatgatacttttgcgtatccatgggagaaagataagcattat
aagatggtgtatcagctggagaagaagtatttccccgagcaatgcttagataaggcgttt
cttcaacccggagaaacttccaaggctgatgattccgggaaagttagagggaagaagaaa
atagctcttggtggaaagaaaaacgaggttaaacgaattattggtacggagaattgtgat
gaggatgacgatgccgatgagaagttggtgttttttgatgaagccaaggagaagcagaag
aaaccagaggaggatgttattgtgaagaaagtggaacagttcttcaagggtgtgacgaaa
tccgccaatgagaaagctgtggctagtggcggcgatggagaacctttccttgtgacgaga
aacggtgaacttcctcctagatgggatggtcctaacggtacagtcgttttggtgaacaaa
cccaaaggatggacttccttcaccgtctgtggtaagctacgaagattagttaaagtgaaa
aaggtgggtcatgctggaacacttgatcccatggctactggtctattaatcgtctgcatt
ggtaaagccaccaaggtggttgacagataccaaggtatgatcaaaggttatagcggagtt
tttcgtcttggtgaagccacttcaactttagacgcagactctcctgtgattcagcgagag
ccttgggaacatattaaagatgatgatattaagaaagctttcacatcatttcttggagag
atatggcaggttcctccaatgttctctgcgataaaagttggaggtgagaagatgtacgat
aaggcaagaagaggagaaactgtagagctttctcccagacgaatctcgattttccagttt
gacatcgaacgcagtttagatgacagacaaaatctggtttttcgggttgtatgctccaag
ggtacatacataagatccctctgtgcagatcttgctaaagctcttggaagttgtgctcac
ctcacagctctccggcgagattcaatcggtgaatattctgctaacgatgcttgggaattc
aacgagttagaagcagcaatttctaaaaactacttctag
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