Eutrema salsugineum (saltwater cress): EUTSA_v10013325mg
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Entry
EUTSA_v10013325mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10013325mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10013325mg
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10013325mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EUTSA_v10013325mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EUTSA_v10013325mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
18019028
NCBI-ProteinID:
XP_006400392
UniProt:
V4KV45
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MRPPFNSFQPQARPQRPPQQQHQNNGFSNHHQHNGYQNSVKANQFGMMNPQMMSNPMMGH
MNNPIPMQNMPIHPQFFNNLSNMPQQQQQQQQLHQFGMPNHINQLLPSLLGNLQFAVANN
NLMGGHSLPLVQPNFFQPSLEPSPFTSQPQLNSFNSRPYPPVPTPHQNHQLHPPGFPEPR
PQPVGNINNTNGSNSKGNDFRNKCTKQQKFKGSGQGFQRSQLHQADNAKKKFGFNKDHMG
KGNYNKMATGLDGSDSGRIAKEKKRISSAMFYTSKEIQQWREARRKNWPTKLNAQKKSKK
NVSDCILDDEAKRRREQLREVLAKQAELGVEVAEIPSHYLSNTDEQVNGDRGDNNGQFQY
KDGRKGRFQNNRHNKRRHGGRDKFSKKPRFEDQNSSQESSITMRKPTLLEKLLSADIKRD
KSQLLQVFRFMVINSFFQELPEQPLKLPLVMVEETGCEHDREEDLISEVLCADLDDDDDH
DDDDVDLGVNGEDNSCDEAFD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccgttcaactcgttccagcctcaagctcgtcctcagagaccgccacagcaa
caacaccagaacaatgggttttctaatcaccaccaacataatgggtatcaaaattcagtg
aaagctaatcaatttgggatgatgaatccacagatgatgagtaatccaatgatgggtcac
atgaacaatccgattccaatgcagaatatgccaatacatcctcagttctttaacaatctc
tccaatatgcctcaacagcaacaacaacaacaacaacttcaccagtttggtatgcccaac
catatcaaccagttgcttccaagcctcttgggaaatcttcaatttgcagttgccaataac
aatcttatgggtggtcactcactgcccctagttcagcctaattttttccagccttctctt
gaaccttctcctttcacttctcagccacagctcaattcctttaactcccgtccgtatcct
cctgttccaactccacatcaaaatcaccaattgcaccctcctggttttccagagccaaga
ccacagcctgtaggaaatatcaacaacaccaatggttccaattctaaagggaatgatttt
cggaataaatgtacaaaacaacagaaattcaaaggctctggtcaaggattccagagatca
cagttgcatcaagcagataatgcaaagaagaagttcgggttcaataaggatcacatgggc
aaagggaactataataagatggcaactggactcgatggatctgattctggaagaatagct
aaggaaaagaaaagaatatcatctgctatgttttatacttcaaaagaaattcagcaatgg
cgtgaagctcggcgtaagaattggcctacaaaactcaatgctcaaaagaaatcaaagaaa
aatgtttcagactgcatccttgacgatgaagcaaaaaggcgtcgtgagcaactccgggaa
gttttagcaaagcaggctgagttaggtgttgaagttgcagaaattccttcacattattta
tccaatacagatgaacaagttaatggagacagaggagataacaatggacaatttcagtac
aaggatgggagaaagggaagatttcagaataatagacacaataagagaagacatggtgga
agagacaagtttagcaagaaaccaaggttcgaagaccaaaattcatctcaagaatcttcc
attacgatgagaaaacctacattgcttgagaagctcctaagcgcagacataaagagagac
aaaagccagttattacaggtcttccgcttcatggttatcaattcgttcttccaggagctg
ccagagcagcctctgaagttgcctttggttatggtagaagaaactggttgtgaacatgat
agggaagaagatctgataagtgaagtattatgcgctgacctagatgatgatgatgatcat
gatgacgatgatgttgatctgggtgtgaatggtgaagataactcatgtgacgaagctttt
gattga
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