Eutrema salsugineum (saltwater cress): EUTSA_v10014073mg
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Entry
EUTSA_v10014073mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10014073mg
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10014073mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10014073mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v10014073mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
EUTSA_v10014073mg
Membrane trafficking [BR:
eus04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
EUTSA_v10014073mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EUTSA_v10014073mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
18019472
NCBI-ProteinID:
XP_006398649
UniProt:
V4LCK1
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MLQIRLRRDSPTETGNGARPSPTETVTVACPDHLVLADLPVAKGIGSVTPTTVIKPVGRR
SRRQLGERVHFCVRCDFPIAIYGRLIPCDHAFCLECARSDSICYLCDERIQKIQTIKMME
GIFICAAPHCLRSFLKKPDFEAHVHQLHGSLLQADAEKEDDNESDVQSTKQQSSASESTL
RGPLRSQQQQSREQQPLLHRSASMSKPQSGFGQVQNYPAESDNSRPPGFETASPKPGIRF
PDYPPMNLMQPPSLPIPMNQNPGLPQQFGFPSAYPTTDGSSPQFYSGAPYEMNRAEGSGT
EQGSLLGHPPPQMMNLNFQGSYPPQSPWTEPRSS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcggctaaggagggattcgccgacggagacaggtaatggagcgagacct
tctccgacggagacagtgacggtagcttgtcccgaccacctcgtcctcgccgatcttcct
gtcgcgaaagggatcggttccgttacccccaccaccgtaatcaagcccgtcggtcgccgt
tctcgccgccagttaggcgagagagttcacttctgcgtccgttgcgattttccgatcgcc
atctatggtcgtctgattccttgtgatcatgcgttttgcctcgaatgtgctcgtagtgat
tccatttgctatctatgtgatgaacggattcagaagattcagacaatcaagatgatggaa
ggaatcttcatctgtgcagctcctcattgtctcaggtctttcctgaagaaacctgacttt
gaagcgcatgtccatcaactccacggcagcctattacaagccgatgcagagaaagaagac
gataacgagtcagatgttcagagcacaaagcagcaatcttcagcttcggaatccacattg
cgaggtcccttaagatcccagcagcaacaatcccgtgaacaacaaccgttgctacacagg
tcagcatctatgtcaaaaccacagtctggatttggtcaggtccagaattaccctgcagag
agcgataactctcgtcctcccggattcgagaccgccagtcctaaaccaggaatccggttc
ccagactacccgcctatgaatctcatgcaaccgcccagcctgcccatacccatgaaccaa
aacccgggtttaccacagcagtttggttttccgtctgcttatccaacaacggatggatcg
tctccacaattctatagcggtgcaccttatgagatgaatagagcagaaggcagcgggaca
gaacaaggctcactgctcgggcatccgcctccacaaatgatgaatctgaatttccaagga
tcttatcctcctcagtcgccttggacagagcccagaagctcatga
DBGET
integrated database retrieval system
