KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10014531mg
Entry
EUTSA_v10014531mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
eus03015  mRNA surveillance pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10014531mg
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10014531mg
   03015 mRNA surveillance pathway
    EUTSA_v10014531mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10014531mg
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10014531mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     EUTSA_v10014531mg
    TREX complex
     EUTSA_v10014531mg
Spliceosome [BR:eus03041]
 Complex C
  Other components
   EJC/TREX
    EUTSA_v10014531mg
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    EUTSA_v10014531mg
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 YHR127W_C
Other DBs
NCBI-GeneID: 18018515
NCBI-ProteinID: XP_006400896
UniProt: V4LF36
LinkDB
Position
Unknown
AA seq 241 aa
MATGLDMSLDDMIAKNRKSRGSGPARGSGSGSGPGPTRRNNANRKSNRSAPYQSAKAPES
TWEHDMYSDRSEAFPPRSSRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTV
HFDRSGRSKGTAEVVFTRRGDALAAVKKYNDVQLDGKPMKIEILGGNLQTARPGNSNFNG
SRRGGQGRGGQQRSGGRGGGRGGGRGGGRGGRPGKGPAEKISAEDLDADLDKYHAGDMET
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgactggattagatatgtctctcgacgacatgatcgccaagaaccgtaagtcccgt
ggatcaggccccgcccgtggatctggatccggatccgggccgggtccaactcgccgcaac
aacgctaatcggaaatccaaccgatctgctccataccaatcggccaaggcgccggagtcc
acctgggaacacgacatgtactccgataggtcagaagctttccctccccgatccagccgt
tcttccgctggaatcgaaactggaacgaagctctacatatccaatttggattacggggtc
atgaacgaagacatcaaggaactgtttgctgaagtcggcgagcttaaacgctacacagtc
cattttgacaggagtggaagatcaaagggaactgctgaagtagtgttcactcggcgtggc
gatgcactcgcagctgtgaagaagtacaacgatgttcagctggatggaaaaccaatgaag
atagagattttggggggcaatcttcaaactgctagacccggaaattcaaactttaatggt
tcaagacgaggaggtcaagggagaggtggtcaacagcgtagtggtggtcgtggtggaggt
cgtgggggtggccgaggtggtggtcgtggagggcgtcctggtaagggacctgcagagaag
atatctgctgaggatcttgatgcagatcttgataagtaccacgcgggagatatggagacc
aactga

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