KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10014822mg
Entry
EUTSA_v10014822mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03020  RNA polymerase
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EUTSA_v10014822mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10014822mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10014822mg
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10014822mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10014822mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EUTSA_v10014822mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EUTSA_v10014822mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EUTSA_v10014822mg
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 18017976
NCBI-ProteinID: XP_006400997
UniProt: V4KWR9
LinkDB
Position
Unknown
AA seq 140 aa
MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ
AGDMPHYTTSDGSVCFFLNL
NT seq 423 nt   +upstreamnt  +downstreamnt
atgttcttccacatagtattggagcggaacatgcagttgcatccacgattctttggtcga
aaccttcgtgaaaatctcgtctctaagctcatgaaagatgtcgagggcacttgcagtggc
cgacatgggtttgtagtggcgataactggaatagaaagcgtaggaaaaggattgatccga
gatgggactggttttgtcacatttccagttaaataccaatgcgtcgtttttagacctttc
aaaggcgagattttagaagctgttgtcactttggtcaataagatgggtttcttcgccgaa
gctggccctgttcagatttttgtctccaagcatttgattccagatgatatggagtttcag
gctggagacatgcctcactataccacatcagatggatcagtgtgtttctttctcaatttg
tga

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