Eutrema salsugineum (saltwater cress): EUTSA_v10015240mg
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Entry
EUTSA_v10015240mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10015240mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10015240mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10015240mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
GramPos_pilinD1
Motif
Other DBs
NCBI-GeneID:
18018364
NCBI-ProteinID:
XP_006399007
UniProt:
V4KR86
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MDSSSNINKALTETRFSDLEPPLSDDIIEVLERSGFEFCTPVQAATIPKLCSRKDVAVDA
ATGSGKTLAFLLPLVEILRISTSYPPKSHQVMGVIISPTRELSTQIYNVAQPFVSTLPNV
NSVLLVGGRGKVEADMETIEKKGGNLLIGTPGRLLDIMERMEILNFRDLEILMLDEADRL
LGTEFQKQVNDILSRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVVVRAESKSESSQQ
LTNSKTPSGLHLEYLECEADKKSSQLVDLLIENKNKKLMVFFMTRASVDYWKLVLSQIPT
LKSMSLIRIHGKMKQNARDRALSSFSEASSGVLLCTDIAARGLDIPGIDCIVQYDPPKDP
DDFIHRVGRTARLGRQGRAIVFLLPKEEDYVEFMDQREVPLQERKCSENASDVIPIMRSA
AMKDRAVLEKGLKAFVSFVRAYKEHKCFDIFRWRELEIGKLGMGYGLLYLPSMSEVRQHR
LSTEGFTPVEGVNFEDIKFKDKSREKQRQQKLEKARKEKQQKEKSEKGKKSSEMVVDACA
TTESYKVSRKRKLSGKQRARNRKLTGKQRQSIQKAEDEEEMAREYRLERKRRKGLIKEED
EPDA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgtcgaacattaacaaagctttaacggagacgcgtttctccgacctcgaa
cctccgctctccgacgatatcatcgaggtgcttgaaaggtccggtttcgagttctgcact
ccggttcaggccgcgacgatccctaaactctgcagccgcaaggatgttgccgtcgacgca
gccaccggttctggaaaaacccttgctttcctcctcccactcgtagagattctccgtata
tccacctcctaccctccgaagtctcatcaggttatgggggtgataatatcgccaacaaga
gagctatcaacgcagatatataacgtggcacagccgtttgtttcgactttgcctaatgtg
aactctgtgctgcttgttggaggccgaggaaaggtagaagctgacatggagactatcgaa
aagaaaggaggcaatctcttgatcggcacgcctggaaggcttttagatataatggaacgg
atggagattctaaatttccgagatcttgagattcttatgttagatgaggcagataggctt
ttgggaacggagttccagaagcaggtgaatgacattttatctcgcttgccaaagcaacgg
aggactggcctcttttcagctacacaaacagaaggcgttgaagagctggccaaggctggg
cttaggaaccctgtgagagttgtagttcgagctgagtcgaagtcggagtcttcccagcaa
ttgacaaactcgaaaacgccttctggtctgcatcttgagtatttggaatgcgaagcagat
aaaaaatcatcacaactagtggatctcctcatcgagaacaaaaataaaaagcttatggtt
ttcttcatgacccgtgcttctgttgattactggaaactcgtactttcacaaattcctacc
ctgaagtccatgtctttgattcgtatccatgggaagatgaagcagaatgctagagacagg
gcattatcttcgttctcagaagcatcaagcggtgtccttttgtgcacagatatcgctgca
cgtggacttgatattccaggcatcgattgcatagttcagtatgatcccccaaaagaccca
gatgatttcatccatagggtcggcagaactgcaagattgggaagacaagggagggccatt
gttttcttactgcccaaggaagaagactatgtagagtttatggaccaaagagaggtccct
cttcaggagagaaaatgctctgagaatgcatccgatgtcatcccaattatgcgttcagct
gccatgaaggaccgagcagtgttggagaagggattaaaggcatttgtttcctttgtccgt
gcttacaaggagcataaatgctttgacattttcagatggagagagcttgaaatcggaaag
ttaggcatggggtatggcctcttgtatcttccttcaatgtctgaagttagacagcacaga
ctttccactgagggtttcacacccgttgaaggcgtcaactttgaggacatcaaattcaag
gacaaatctcgggagaaacaaagacagcaaaagttagagaaagcaaggaaagagaaacag
cagaaagagaaaagtgagaaaggcaagaaaagctcggaaatggtggttgatgcttgtgct
actactgaatcttacaaagtgtcgagaaagagaaagttatcaggaaaacagagagcgaga
aatagaaagttaacaggaaagcagagacaaagcatccaaaaagctgaagatgaagaagag
atggctcgagaatatcggttggagcgaaaacggaggaaagggttgattaaagaagaagat
gagcctgatgcctga
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