Eutrema salsugineum (saltwater cress): EUTSA_v10015473mg
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Entry
EUTSA_v10015473mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K15082
DNA repair protein RAD7
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10015473mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
EUTSA_v10015473mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
BRX
Motif
Other DBs
NCBI-GeneID:
18017428
NCBI-ProteinID:
XP_006400695
UniProt:
V4LQN2
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MASPGGSREIPAAFAEPDSDDEEAPPVDTTFLDLLCIAADTVMKRDARIRYEQRLAEEAK
YHKKIAKRFALDLHSDQIPKNIFQEQSKEEEKEEEEEEEEEEDQVNGKGIKSLFNEAKEA
IEKRRTDSDEYTSSSIGIELNLTKVKEVPTLMEMSLRVLADNSEAITSLNLVPDHLRTKL
SNLVSSKRKLDTRFMKLLIQGSPSEISVKNCVDIEEKDLANILCDCNRVSLKVLNLDLCG
RAMTENVITEFLKRSPNGFPYLTKLSLQGAFCLTNNGLALIARSAPLLRNINLSYCSYLT
SRAVKILADNFGSTLRGLNIGGCQGIIPSNVFKRSLRKFEKLSYLSVAGLNSIHDVVAAF
VASRGSNLTHLSLASCTYLNDGTMWTVGRCCPNLEVLDISQLDYLTDASLKEITNGCRSL
KSVRFTRNRFSDEAVAAFLEVSGGSLTQLFLDHVRDVGQETALSLANTCNRLRYLDLSWC
RKLTEEDLRRILSCCSLLRSLKLFGWMQVRDEFLEELSGSPVHIVGLKMTSLFAHLDDFY
TSVDDKFF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccggtggttctcgagaaattccggcggcgttcgctgaaccagattccgac
gatgaagaagcccctccagtcgatactacgtttttggatttgctttgcattgcagcggat
acggttatgaaacgcgatgctcgaattcgttacgagcagcgattggctgaagaggccaag
tatcacaagaaaatcgcgaagaggttcgctcttgatttgcattctgatcaaattcccaag
aatatttttcaagaacaaagcaaagaagaagaaaaagaagaagaagaagaagaagaagaa
gaagaagatcaagttaatggaaagggtataaaaagtctgtttaacgaagctaaggaagcg
atcgagaagaggaggacagattctgacgaatatacatcatcaagcattggaatcgagttg
aatctgacgaaagtaaaggaggttcctacgctaatggagatgagtttgcgagttcttgct
gataactctgaagcaatcacgtctcttaacctcgtccctgatcacttgaggacgaagctc
tcgaatctcgttagcagtaaaaggaaactcgacacgcgttttatgaagctactgatacag
ggctctccgtctgagatctccgtcaagaactgcgtcgacatagaggagaaagacttggct
aatatcctctgtgactgtaacagagttagcttgaaggtgttgaatcttgatctctgcgga
cgagccatgacggagaacgtcataaccgagttcttgaaacgctcgccgaacgggttccct
tatctgaccaagctttctcttcaaggagcgttctgtttaacaaacaatggattggccttg
atcgcgagatctgctcctctgcttcggaatattaacctctcgtattgctcttacctcact
tcccgagctgtgaagattcttgctgataactttggatccactcttagagggcttaacatc
ggaggatgccaagggatcataccatctaatgtattcaagagaagcctacgtaagtttgag
aaacttagctatctctctgttgcagggctcaatagcattcatgatgttgttgcggcgttc
gttgcttctcgtggctccaaccttactcatctttctctcgcttcttgcacatacttgaat
gatggaactatgtggactgttgggagatgttgtccgaatctagaagttcttgacatctca
caactggattatttgactgatgcgtcattaaaagaaattaccaatggttgcagatctttg
aagtcagtcagattcacgagaaaccgatttagtgatgaagctgtggccgcgtttcttgaa
gtctcgggaggatctcttacccaactcttccttgaccatgtccgagatgtcggtcaagag
actgccctttcgctcgccaatacatgtaataggttgcgttatttggacctctcttggtgt
cgaaaactcacagaagaagacctcagacggatcttgagttgttgctcgttacttagatcg
cttaagctatttggatggatgcaggtgagggatgaatttcttgaagaactttcaggatca
ccagttcatatcgttggattgaaaatgacttcactttttgctcatcttgatgacttttac
acaagtgtagatgacaagttcttctga
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