Eutrema salsugineum (saltwater cress): EUTSA_v10015501mg
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Entry
EUTSA_v10015501mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10015501mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10015501mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10015501mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EUTSA_v10015501mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
EUTSA_v10015501mg
microRNA pathway
RISC loading complex
EUTSA_v10015501mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18016803
NCBI-ProteinID:
XP_006400673
UniProt:
V4N8T6
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MDSSKSALLPIARRGNGSKGQKIQLRTNHFRVAITYEDGNPVVAKGIGRKILENVQDTYK
SDLGSKYFAYDGDKTLFTVGPLPANKLDFSVVLEDMSCSRGNTRSDDADRKRLRRPNKSK
KFNVAITFAKQISIQAIDGALQGIETNHLQDAIRVLDVILRQNAARQGCLLVRQSFFHND
AKFFSKEHGGFYLCRGFHSSFRTTQGGLSLNMDVSSTLIVKPGPVVDFLTANQGKNRFSI
DWKEAERTLKNLRVKVITTNQEYKITGLSRLPCKDQTFIWKQKKGNGEVEEEIKVFDYYK
KNHDIRLHDSGDLRCINVGKPKRPTYFPMELCHLVSLQRYTKALTIFQRSNLVRESIQKP
LDKRNMLNRALENCNYNDDTLLQECGVRIGSEFTQVEGHILPTPNLKVGNGKDIIPSNGR
WNFNNKEFVKPVKVTGWAVVNFSVQCDPHRIVRDLIRCGKMKGMDVVLPLDVFEEGHRFK
AAPGSVRVEKMFEVMKLKFRDQDWGKPEFLLCILSKNSNVYGPWKKRTLIEDGIKNQCIA
PPNIVKDQYLTNVLLKINAKLGGLNSELAIERSLGIPAVMRVPTIIIGMDVSHGSPGQSD
VPSISAVVSSREWPLISKYKACVRTQSPKVEMIDNLFNRVSDKVDDGIMRELLDDFKSCS
GMKPDHIIVFRDGLSESQFNQVLNIELGQMKQACKFLEENWYPKFTVIIAQKKHHTRFFQ
ERRPADNVPPGTIIDSKICHPRNNDFYLCAHAGMLGTTRPTHYHVLYDEIGFSTDDLQEL
VHSLSYVYQRSTTAISVDFAAFFHDKGTAMKFEDMSETSSSHGGITTSGAAPVPPMPKLN
KAVATSMFFC
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggattcgagcaagagtgctcttcttccaattgctcggcgtgggaacggctcaaaaggc
cagaagattcagctgcgtactaaccacttcagagttgctatcacatacgaagatgggaat
ccagttgtagccaagggtatcggcagaaagattcttgaaaatgttcaggacacctacaaa
agtgatttgggttccaaatactttgcttacgatggagacaagactctgttcactgtcggt
ccacttcccgccaacaaactagacttctctgttgttcttgaagacatgtcttgtagcaga
ggcaacacaaggagcgatgatgcggacaggaagagattaaggcgtcctaacaaatccaag
aaattcaacgttgcaattacctttgctaaacaaatctcaatccaagctattgatggtgct
cttcaaggaattgaaacaaatcatcttcaagatgctataagagtgctagatgttatcttg
cgccagaacgcagctagacagggttgcctccttgttcgtcaatccttcttccacaatgac
gcaaagttcttttcgaaagagcatggaggtttttatctatgcagaggattccattctagc
ttcagaactactcagggaggcttatcccttaatatggatgtttcgtctacgttgatagta
aaaccaggtcctgttgttgatttccttactgcaaatcaagggaaaaatcgattctctatt
gattggaaagaggccgaacgtactctcaagaatcttagagttaaagtcatcaccacaaat
caagaatacaagataaccggactaagtagactaccctgcaaagatcaaacgtttatttgg
aagcaaaagaaaggaaacggggaagttgaggaggagattaaagtgtttgattactacaag
aaaaaccatgacatcagacttcatgattcaggtgacttacgttgcatcaatgttggtaag
ccgaagcgtcctacttactttcccatggagctctgtcatcttgtttctctgcaacgctat
acgaaagctcttactattttccagaggagtaacctagtcagagaatcaatacagaagcca
ctagataagaggaatatgttaaacagagctctagagaactgtaattataatgatgacaca
ctgttgcaagaatgtggtgtcagaattggctctgaattcactcaagtggaaggtcacata
ctaccaactccaaatctgaaagtgggcaatggaaaggacattattcctagcaatgggcgt
tggaatttcaacaataaggaatttgttaagccagtcaaagttactggatgggctgttgtg
aacttctctgttcagtgtgacccgcacaggattgttcgtgacttgatcagatgtggaaag
atgaaaggaatggacgtagttcttccacttgatgtctttgaagaaggtcatcggtttaag
gctgcacctggttctgtaagagtggagaagatgtttgaagttatgaaactgaaattccgg
gaccaggactggggaaaacctgaattccttctttgcatactctcgaaaaactctaatgtt
tatggtccatggaaaaagagaactcttattgaagatggaataaagaatcagtgtattgct
cctcccaacatcgtaaaggatcagtatctcacaaatgttctcctcaaaattaatgctaag
cttggtggattaaattcagagttagctattgagcggtcactaggaatccctgcggtgatg
agagtccctaccatcattattgggatggatgtatctcatggctctccaggacagtctgat
gtcccatccatttccgcggttgtgagctccagagaatggcccttaatctcaaaatacaag
gcttgtgtgcgtacacagtcacctaaagtcgaaatgattgacaatctctttaaccgcgtc
tctgataaagttgacgatggtattatgagggagctcttggatgattttaaatcctgctct
ggtatgaaacccgatcacattatcgttttcagggatggtttgagtgaatctcagtttaac
caagttcttaatattgaactgggtcagatgaagcaggcgtgcaagtttcttgaggagaat
tggtatcccaagtttacagtgatcattgctcagaaaaagcaccacaccaggttcttccag
gagagaagacctgctgataatgttcccccaggaacaataatcgacagcaagatctgtcac
ccacgcaacaacgatttctatctttgtgctcatgctggaatgcttggaactacgaggcca
acgcattaccatgtgctctacgatgagattggattttcgacagatgacctccaagaactt
gtccattctctatcctatgtctaccagaggagcaccactgccatctcagtcgattttgct
gctttctttcatgacaagggaactgcaatgaagtttgaggacatgtctgagacttcatcg
agccatggtgggatcacaacatctggagctgcccctgtgcctcctatgccgaagctgaac
aaggctgttgctacctcaatgttcttctgctga
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