Eutrema salsugineum (saltwater cress): EUTSA_v10015832mg
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Entry
EUTSA_v10015832mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10015832mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EUTSA_v10015832mg
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
18017242
NCBI-ProteinID:
XP_006399402
UniProt:
V4KSD8
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MTGNIGKGVTQYKVTDPSDDPLSPKPGTLRYGATLIKGKKWITFKRNMKIKLHKPLLISS
FTTLDGRGVSAHIKGPGCLIVYKATDVIIHGLKIHDCKAHKPSSVMGPDSKIIPLGQVDG
DAIRLVTAKKVWIDHNTLYDCEDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDDGYVRD
KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSMSPRVKSESNYFVA
PKSGSKERTLKPLKNSLLQLERYSAPETPSVRTTTTTLNMTF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaatatcggtaaaggagtcacacaatacaaagtaaccgacccatctgatgat
cctttaagccctaaaccaggaacccttagatacggagcaacgctcatcaaaggaaagaaa
tggatcacattcaaaagaaacatgaagatcaaacttcataaaccgctactaatcagcagc
ttcacgacgctcgatggtcgcggtgtgagcgctcacatcaagggtcccggttgtctcata
gtctacaaagccacggatgtgatcattcatggacttaagatccatgattgtaaagctcat
aaaccaagctcagttatgggaccggactcaaagatcattccacttggacaagtggacggc
gacgcaatcaggctggtcacggctaagaaagtgtggatcgaccacaacacgctctatgat
tgcgaagacggtctattagacgtcacaagagggagtactgacgtcacagtgtccaacaat
tggtttaggaaccaggacaaggtcatgcttcttggacatgatgatggctatgtaagagac
aaagacatgagagtcactgttgtgtttaaccactttggtcctaattgcaaccagagaatg
ccaagagtgcgacatggatatgctcatgtcgcaaataactattaccaaggatggactcaa
tacgcaattggaggaagcatgagccctcgtgtgaagagcgaatcaaactatttcgtcgca
ccaaaatccggaagcaaagagcgaacgctaaaaccgttaaagaactcacttcttcagctg
gagcgttacagtgcaccagaaactccatctgttagaacaacaacaacaacgcttaacatg
accttttag
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